Protein–RNA interactions for Protein: Q01405

Sec23a, Protein transport protein Sec23A, mousemouse

Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec23aQ01405 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Sec23aQ01405 Gm15743-202ENSMUST00000182690 1901 ntBASIC18.8■□□□□ 0.6
Sec23aQ01405 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sec23aQ01405 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC18.8■□□□□ 0.6
Sec23aQ01405 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Sec23aQ01405 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sec23aQ01405 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sec23aQ01405 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sec23aQ01405 Gm12895-201ENSMUST00000122214 226 ntBASIC18.8■□□□□ 0.6
Sec23aQ01405 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC18.8■□□□□ 0.6
Sec23aQ01405 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC18.8■□□□□ 0.6
Sec23aQ01405 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Sec23aQ01405 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC18.8■□□□□ 0.6
Sec23aQ01405 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Sec23aQ01405 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sec23aQ01405 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Sec23aQ01405 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sec23aQ01405 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
Sec23aQ01405 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sec23aQ01405 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
Sec23aQ01405 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Sec23aQ01405 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sec23aQ01405 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Sec23aQ01405 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sec23aQ01405 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sec23aQ01405 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Sec23aQ01405 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sec23aQ01405 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sec23aQ01405 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sec23aQ01405 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sec23aQ01405 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sec23aQ01405 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sec23aQ01405 Gm15372-201ENSMUST00000120729 834 ntBASIC18.79■□□□□ 0.6
Sec23aQ01405 Rprl3-201ENSMUST00000157400 290 ntBASIC18.79■□□□□ 0.6
Sec23aQ01405 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sec23aQ01405 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sec23aQ01405 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sec23aQ01405 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sec23aQ01405 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sec23aQ01405 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sec23aQ01405 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sec23aQ01405 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sec23aQ01405 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sec23aQ01405 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sec23aQ01405 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sec23aQ01405 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sec23aQ01405 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Sec23aQ01405 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sec23aQ01405 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.78■□□□□ 0.6
Sec23aQ01405 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sec23aQ01405 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sec23aQ01405 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Sec23aQ01405 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Sec23aQ01405 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sec23aQ01405 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sec23aQ01405 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sec23aQ01405 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Sec23aQ01405 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC18.78■□□□□ 0.6
Sec23aQ01405 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sec23aQ01405 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sec23aQ01405 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Sec23aQ01405 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sec23aQ01405 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sec23aQ01405 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sec23aQ01405 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC18.77■□□□□ 0.6
Sec23aQ01405 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Sec23aQ01405 Gm7507-201ENSMUST00000183053 1008 ntBASIC18.77■□□□□ 0.6
Sec23aQ01405 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC18.77■□□□□ 0.6
Sec23aQ01405 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC18.77■□□□□ 0.6
Sec23aQ01405 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Sec23aQ01405 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Sec23aQ01405 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Sec23aQ01405 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Sec23aQ01405 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Sec23aQ01405 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sec23aQ01405 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
Sec23aQ01405 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sec23aQ01405 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sec23aQ01405 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.76■□□□□ 0.59
Sec23aQ01405 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sec23aQ01405 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sec23aQ01405 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sec23aQ01405 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sec23aQ01405 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sec23aQ01405 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sec23aQ01405 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Sec23aQ01405 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sec23aQ01405 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sec23aQ01405 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC18.76■□□□□ 0.59
Sec23aQ01405 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sec23aQ01405 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sec23aQ01405 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC18.76■□□□□ 0.59
Sec23aQ01405 Gm44454-201ENSMUST00000198541 138 ntBASIC18.76■□□□□ 0.59
Sec23aQ01405 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC18.76■□□□□ 0.59
Sec23aQ01405 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sec23aQ01405 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Sec23aQ01405 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sec23aQ01405 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC18.76■□□□□ 0.59
Sec23aQ01405 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Sec23aQ01405 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms