Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cacna1aP97445 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cacna1aP97445 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cacna1aP97445 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.11■□□□□ 0.01
Cacna1aP97445 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cacna1aP97445 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cacna1aP97445 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cacna1aP97445 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cacna1aP97445 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cacna1aP97445 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC15.11■□□□□ 0.01
Cacna1aP97445 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cacna1aP97445 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC15.11■□□□□ 0.01
Cacna1aP97445 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cacna1aP97445 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC15.11■□□□□ 0.01
Cacna1aP97445 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cacna1aP97445 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Cacna1aP97445 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Cacna1aP97445 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC15.11■□□□□ 0.01
Cacna1aP97445 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cacna1aP97445 Hist1h2al-201ENSMUST00000091708 339 ntBASIC15.11■□□□□ 0.01
Cacna1aP97445 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cacna1aP97445 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cacna1aP97445 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC15.11■□□□□ 0.01
Cacna1aP97445 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Cacna1aP97445 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cacna1aP97445 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cacna1aP97445 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cacna1aP97445 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cacna1aP97445 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cacna1aP97445 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cacna1aP97445 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cacna1aP97445 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cacna1aP97445 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cacna1aP97445 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
Cacna1aP97445 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cacna1aP97445 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cacna1aP97445 Gm23547-201ENSMUST00000158210 271 ntBASIC15.1■□□□□ 0.01
Cacna1aP97445 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cacna1aP97445 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cacna1aP97445 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.1■□□□□ 0.01
Cacna1aP97445 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cacna1aP97445 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cacna1aP97445 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cacna1aP97445 Gm9889-202ENSMUST00000206983 1577 ntBASIC15.09■□□□□ 0.01
Cacna1aP97445 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC15.09■□□□□ 0.01
Cacna1aP97445 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Cacna1aP97445 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cacna1aP97445 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cacna1aP97445 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cacna1aP97445 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cacna1aP97445 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
Cacna1aP97445 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cacna1aP97445 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC15.09■□□□□ 0.01
Cacna1aP97445 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
Cacna1aP97445 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC15.09■□□□□ 0.01
Cacna1aP97445 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cacna1aP97445 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC15.09■□□□□ 0.01
Cacna1aP97445 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cacna1aP97445 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Cacna1aP97445 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cacna1aP97445 Gm18856-201ENSMUST00000178096 1374 ntBASIC15.09■□□□□ 0.01
Cacna1aP97445 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cacna1aP97445 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cacna1aP97445 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC15.09■□□□□ 0.01
Cacna1aP97445 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cacna1aP97445 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Cacna1aP97445 Gm13418-201ENSMUST00000119097 944 ntBASIC15.09■□□□□ 0.01
Cacna1aP97445 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
Cacna1aP97445 Gm25745-201ENSMUST00000174945 133 ntBASIC15.09■□□□□ 0.01
Cacna1aP97445 Gm27628-201ENSMUST00000184911 107 ntBASIC15.09■□□□□ 0.01
Cacna1aP97445 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cacna1aP97445 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cacna1aP97445 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Cacna1aP97445 Gm45203-201ENSMUST00000206384 1831 ntBASIC15.08■□□□□ 0.01
Cacna1aP97445 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Cacna1aP97445 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Cacna1aP97445 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Cacna1aP97445 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC15.08■□□□□ 0.01
Cacna1aP97445 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Cacna1aP97445 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Cacna1aP97445 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
Cacna1aP97445 Gm5953-201ENSMUST00000220644 2616 ntBASIC15.08■□□□□ 0
Cacna1aP97445 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Cacna1aP97445 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC15.08■□□□□ 0
Cacna1aP97445 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cacna1aP97445 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cacna1aP97445 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cacna1aP97445 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Cacna1aP97445 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC15.08■□□□□ 0
Cacna1aP97445 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC15.08■□□□□ 0
Cacna1aP97445 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cacna1aP97445 Gm44872-201ENSMUST00000207864 420 ntBASIC15.08■□□□□ 0
Cacna1aP97445 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cacna1aP97445 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cacna1aP97445 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC15.08■□□□□ 0
Cacna1aP97445 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Cacna1aP97445 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cacna1aP97445 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cacna1aP97445 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cacna1aP97445 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms