Protein–RNA interactions for Protein: P97390

Vps45, Vacuolar protein sorting-associated protein 45, mousemouse

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps45P97390 Gm25925-201ENSMUST00000158314 306 ntBASIC16.95■□□□□ 0.3
Vps45P97390 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.95■□□□□ 0.3
Vps45P97390 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vps45P97390 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Vps45P97390 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Vps45P97390 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vps45P97390 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Vps45P97390 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vps45P97390 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Vps45P97390 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vps45P97390 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Vps45P97390 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Vps45P97390 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vps45P97390 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.94■□□□□ 0.3
Vps45P97390 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Vps45P97390 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vps45P97390 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Vps45P97390 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Vps45P97390 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Vps45P97390 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
Vps45P97390 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Vps45P97390 Gm6623-201ENSMUST00000173570 544 ntBASIC16.94■□□□□ 0.3
Vps45P97390 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC16.94■□□□□ 0.3
Vps45P97390 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC16.94■□□□□ 0.3
Vps45P97390 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC16.94■□□□□ 0.3
Vps45P97390 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vps45P97390 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vps45P97390 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
Vps45P97390 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vps45P97390 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.94■□□□□ 0.3
Vps45P97390 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Vps45P97390 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vps45P97390 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Vps45P97390 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Vps45P97390 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vps45P97390 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Vps45P97390 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Vps45P97390 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vps45P97390 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.94■□□□□ 0.3
Vps45P97390 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Vps45P97390 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps45P97390 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps45P97390 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.93■□□□□ 0.3
Vps45P97390 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps45P97390 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.93■□□□□ 0.3
Vps45P97390 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Vps45P97390 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Vps45P97390 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Vps45P97390 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps45P97390 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Vps45P97390 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps45P97390 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps45P97390 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Vps45P97390 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps45P97390 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps45P97390 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.93■□□□□ 0.3
Vps45P97390 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps45P97390 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Vps45P97390 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps45P97390 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps45P97390 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps45P97390 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps45P97390 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Vps45P97390 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps45P97390 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Vps45P97390 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps45P97390 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps45P97390 Gm11336-201ENSMUST00000118168 334 ntBASIC16.92■□□□□ 0.3
Vps45P97390 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Vps45P97390 Gm28659-201ENSMUST00000188013 759 ntBASIC16.92■□□□□ 0.3
Vps45P97390 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC16.92■□□□□ 0.3
Vps45P97390 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Vps45P97390 AC164629.2-201ENSMUST00000217916 270 ntBASIC16.92■□□□□ 0.3
Vps45P97390 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
Vps45P97390 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps45P97390 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps45P97390 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Vps45P97390 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps45P97390 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps45P97390 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.92■□□□□ 0.3
Vps45P97390 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps45P97390 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps45P97390 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
Vps45P97390 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps45P97390 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps45P97390 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps45P97390 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps45P97390 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Vps45P97390 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps45P97390 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Vps45P97390 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Vps45P97390 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Vps45P97390 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC16.91■□□□□ 0.3
Vps45P97390 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Vps45P97390 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC16.91■□□□□ 0.3
Vps45P97390 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Vps45P97390 Gm45328-201ENSMUST00000210942 917 ntBASIC16.91■□□□□ 0.3
Vps45P97390 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC16.91■□□□□ 0.3
Vps45P97390 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps45P97390 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms