Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Mir6404-201ENSMUST00000183699 94 ntBASIC20.63■□□□□ 0.89
Nkx2-3P97334 Gm8655-201ENSMUST00000221159 852 ntBASIC20.63■□□□□ 0.89
Nkx2-3P97334 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nkx2-3P97334 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nkx2-3P97334 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nkx2-3P97334 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nkx2-3P97334 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nkx2-3P97334 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC20.62■□□□□ 0.89
Nkx2-3P97334 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nkx2-3P97334 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC20.62■□□□□ 0.89
Nkx2-3P97334 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Nkx2-3P97334 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Nkx2-3P97334 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Nkx2-3P97334 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC20.62■□□□□ 0.89
Nkx2-3P97334 Gm43073-201ENSMUST00000198200 1189 ntBASIC20.62■□□□□ 0.89
Nkx2-3P97334 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nkx2-3P97334 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nkx2-3P97334 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nkx2-3P97334 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Nkx2-3P97334 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nkx2-3P97334 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nkx2-3P97334 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Nkx2-3P97334 AC122901.1-201ENSMUST00000214203 1790 ntBASIC20.62■□□□□ 0.89
Nkx2-3P97334 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nkx2-3P97334 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Nkx2-3P97334 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC20.61■□□□□ 0.89
Nkx2-3P97334 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC20.61■□□□□ 0.89
Nkx2-3P97334 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nkx2-3P97334 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nkx2-3P97334 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Nkx2-3P97334 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nkx2-3P97334 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nkx2-3P97334 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC20.61■□□□□ 0.89
Nkx2-3P97334 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nkx2-3P97334 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nkx2-3P97334 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nkx2-3P97334 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Nkx2-3P97334 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nkx2-3P97334 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nkx2-3P97334 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Nkx2-3P97334 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nkx2-3P97334 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nkx2-3P97334 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Nkx2-3P97334 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nkx2-3P97334 Gm14494-201ENSMUST00000118786 435 ntBASIC20.6■□□□□ 0.89
Nkx2-3P97334 Gm15467-201ENSMUST00000120582 445 ntBASIC20.6■□□□□ 0.89
Nkx2-3P97334 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC20.6■□□□□ 0.89
Nkx2-3P97334 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC20.6■□□□□ 0.89
Nkx2-3P97334 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nkx2-3P97334 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nkx2-3P97334 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nkx2-3P97334 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC20.6■□□□□ 0.89
Nkx2-3P97334 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Nkx2-3P97334 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Nkx2-3P97334 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nkx2-3P97334 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Nkx2-3P97334 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC20.59■□□□□ 0.89
Nkx2-3P97334 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nkx2-3P97334 Gm16401-202ENSMUST00000197463 2074 ntBASIC20.59■□□□□ 0.89
Nkx2-3P97334 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nkx2-3P97334 Gm5682-201ENSMUST00000173402 505 ntBASIC20.59■□□□□ 0.89
Nkx2-3P97334 Gm27646-201ENSMUST00000183989 110 ntBASIC20.59■□□□□ 0.89
Nkx2-3P97334 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nkx2-3P97334 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC20.59■□□□□ 0.89
Nkx2-3P97334 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC20.59■□□□□ 0.89
Nkx2-3P97334 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC20.59■□□□□ 0.89
Nkx2-3P97334 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Nkx2-3P97334 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC20.59■□□□□ 0.89
Nkx2-3P97334 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC20.59■□□□□ 0.89
Nkx2-3P97334 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nkx2-3P97334 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nkx2-3P97334 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Nkx2-3P97334 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nkx2-3P97334 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Nkx2-3P97334 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC20.58■□□□□ 0.89
Nkx2-3P97334 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC20.58■□□□□ 0.89
Nkx2-3P97334 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Nkx2-3P97334 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC20.58■□□□□ 0.89
Nkx2-3P97334 Gm9172-201ENSMUST00000212092 954 ntBASIC20.58■□□□□ 0.89
Nkx2-3P97334 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Nkx2-3P97334 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC20.58■□□□□ 0.89
Nkx2-3P97334 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nkx2-3P97334 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Nkx2-3P97334 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Nkx2-3P97334 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Nkx2-3P97334 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Nkx2-3P97334 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Nkx2-3P97334 Gm5837-201ENSMUST00000191844 1369 ntBASIC20.58■□□□□ 0.88
Nkx2-3P97334 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Nkx2-3P97334 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nkx2-3P97334 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Nkx2-3P97334 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC20.57■□□□□ 0.88
Nkx2-3P97334 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC20.57■□□□□ 0.88
Nkx2-3P97334 Gm37500-201ENSMUST00000192059 1443 ntBASIC20.57■□□□□ 0.88
Nkx2-3P97334 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC20.57■□□□□ 0.88
Nkx2-3P97334 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC20.57■□□□□ 0.88
Nkx2-3P97334 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nkx2-3P97334 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nkx2-3P97334 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Nkx2-3P97334 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms