Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC17.76■□□□□ 0.43
CiitaP79621 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC17.76■□□□□ 0.43
CiitaP79621 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CiitaP79621 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
CiitaP79621 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CiitaP79621 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CiitaP79621 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CiitaP79621 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.76■□□□□ 0.43
CiitaP79621 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CiitaP79621 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CiitaP79621 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CiitaP79621 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CiitaP79621 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CiitaP79621 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.75■□□□□ 0.43
CiitaP79621 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CiitaP79621 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CiitaP79621 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CiitaP79621 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CiitaP79621 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CiitaP79621 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CiitaP79621 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CiitaP79621 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CiitaP79621 AC114585.2-202ENSMUST00000228094 426 ntBASIC17.75■□□□□ 0.43
CiitaP79621 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CiitaP79621 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CiitaP79621 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CiitaP79621 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CiitaP79621 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
CiitaP79621 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CiitaP79621 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.75■□□□□ 0.43
CiitaP79621 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.75■□□□□ 0.43
CiitaP79621 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CiitaP79621 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CiitaP79621 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CiitaP79621 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CiitaP79621 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CiitaP79621 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CiitaP79621 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CiitaP79621 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CiitaP79621 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CiitaP79621 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CiitaP79621 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC17.74■□□□□ 0.43
CiitaP79621 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CiitaP79621 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC17.74■□□□□ 0.43
CiitaP79621 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC17.74■□□□□ 0.43
CiitaP79621 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC17.74■□□□□ 0.43
CiitaP79621 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
CiitaP79621 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CiitaP79621 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CiitaP79621 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CiitaP79621 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CiitaP79621 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CiitaP79621 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CiitaP79621 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CiitaP79621 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CiitaP79621 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CiitaP79621 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CiitaP79621 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CiitaP79621 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CiitaP79621 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CiitaP79621 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CiitaP79621 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
CiitaP79621 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CiitaP79621 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CiitaP79621 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CiitaP79621 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CiitaP79621 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CiitaP79621 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CiitaP79621 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CiitaP79621 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.73■□□□□ 0.43
CiitaP79621 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CiitaP79621 Gm15165-201ENSMUST00000118140 502 ntBASIC17.73■□□□□ 0.43
CiitaP79621 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC17.73■□□□□ 0.43
CiitaP79621 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC17.73■□□□□ 0.43
CiitaP79621 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CiitaP79621 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
CiitaP79621 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CiitaP79621 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CiitaP79621 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CiitaP79621 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CiitaP79621 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CiitaP79621 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CiitaP79621 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CiitaP79621 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CiitaP79621 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CiitaP79621 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.72■□□□□ 0.43
CiitaP79621 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CiitaP79621 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CiitaP79621 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CiitaP79621 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC17.72■□□□□ 0.43
CiitaP79621 Gm13216-201ENSMUST00000117145 591 ntBASIC17.72■□□□□ 0.43
CiitaP79621 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC17.72■□□□□ 0.43
CiitaP79621 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC17.72■□□□□ 0.43
CiitaP79621 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CiitaP79621 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CiitaP79621 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CiitaP79621 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CiitaP79621 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CiitaP79621 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CiitaP79621 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms