Protein–RNA interactions for Protein: P70362

Ufd1, Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1P70362 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.14□□□□□ -0.15
Ufd1P70362 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.14□□□□□ -0.15
Ufd1P70362 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ufd1P70362 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ufd1P70362 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Ufd1P70362 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Ufd1P70362 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ufd1P70362 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ufd1P70362 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ufd1P70362 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Ufd1P70362 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ufd1P70362 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ufd1P70362 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ufd1P70362 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ufd1P70362 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ufd1P70362 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ufd1P70362 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ufd1P70362 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Ufd1P70362 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ufd1P70362 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Ufd1P70362 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ufd1P70362 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ufd1P70362 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ufd1P70362 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ufd1P70362 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC14.13□□□□□ -0.15
Ufd1P70362 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC14.13□□□□□ -0.15
Ufd1P70362 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC14.13□□□□□ -0.15
Ufd1P70362 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC14.13□□□□□ -0.15
Ufd1P70362 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC14.13□□□□□ -0.15
Ufd1P70362 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ufd1P70362 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ufd1P70362 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ufd1P70362 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.13□□□□□ -0.15
Ufd1P70362 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ufd1P70362 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ufd1P70362 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ufd1P70362 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ufd1P70362 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ufd1P70362 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Ufd1P70362 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ufd1P70362 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ufd1P70362 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ufd1P70362 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ufd1P70362 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Ufd1P70362 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ufd1P70362 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ufd1P70362 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ufd1P70362 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ufd1P70362 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ufd1P70362 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ufd1P70362 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ufd1P70362 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC14.12□□□□□ -0.15
Ufd1P70362 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ufd1P70362 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ufd1P70362 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ufd1P70362 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Ufd1P70362 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Ufd1P70362 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ufd1P70362 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ufd1P70362 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
Ufd1P70362 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
Ufd1P70362 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ufd1P70362 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ufd1P70362 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ufd1P70362 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ufd1P70362 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ufd1P70362 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ufd1P70362 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ufd1P70362 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ufd1P70362 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ufd1P70362 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ufd1P70362 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Ufd1P70362 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
Ufd1P70362 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ufd1P70362 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ufd1P70362 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC14.11□□□□□ -0.15
Ufd1P70362 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ufd1P70362 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ufd1P70362 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ufd1P70362 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ufd1P70362 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ufd1P70362 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ufd1P70362 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ufd1P70362 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ufd1P70362 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ufd1P70362 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
Ufd1P70362 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ufd1P70362 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Ufd1P70362 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ufd1P70362 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
Ufd1P70362 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ufd1P70362 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ufd1P70362 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ufd1P70362 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ufd1P70362 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ufd1P70362 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ufd1P70362 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Ufd1P70362 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ufd1P70362 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.1□□□□□ -0.15
Ufd1P70362 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms