Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Six5P70178 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Six5P70178 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Six5P70178 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Six5P70178 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Six5P70178 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC15.36■□□□□ 0.05
Six5P70178 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Six5P70178 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Six5P70178 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Six5P70178 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Six5P70178 Gm11860-201ENSMUST00000122346 1010 ntBASIC15.36■□□□□ 0.05
Six5P70178 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC15.36■□□□□ 0.05
Six5P70178 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Six5P70178 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC15.36■□□□□ 0.05
Six5P70178 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC15.36■□□□□ 0.05
Six5P70178 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC15.36■□□□□ 0.05
Six5P70178 Gm5587-201ENSMUST00000206270 674 ntBASIC15.36■□□□□ 0.05
Six5P70178 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Six5P70178 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Six5P70178 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Six5P70178 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Six5P70178 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Six5P70178 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Six5P70178 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Six5P70178 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Six5P70178 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Six5P70178 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Six5P70178 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Six5P70178 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Six5P70178 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Six5P70178 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Six5P70178 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Six5P70178 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Six5P70178 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Six5P70178 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Six5P70178 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Six5P70178 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC15.35■□□□□ 0.05
Six5P70178 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC15.35■□□□□ 0.05
Six5P70178 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Six5P70178 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC15.35■□□□□ 0.05
Six5P70178 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC15.35■□□□□ 0.05
Six5P70178 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Six5P70178 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Six5P70178 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Six5P70178 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Six5P70178 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
Six5P70178 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Six5P70178 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Six5P70178 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Six5P70178 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Six5P70178 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Six5P70178 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Six5P70178 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Six5P70178 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Six5P70178 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Six5P70178 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Six5P70178 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Six5P70178 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
Six5P70178 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Six5P70178 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Six5P70178 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Six5P70178 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Six5P70178 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Six5P70178 Gm15743-202ENSMUST00000182690 1901 ntBASIC15.34■□□□□ 0.05
Six5P70178 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Six5P70178 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Six5P70178 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Six5P70178 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Six5P70178 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Six5P70178 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Six5P70178 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Six5P70178 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Six5P70178 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Six5P70178 Gm45244-201ENSMUST00000211328 2200 ntBASIC15.33■□□□□ 0.05
Six5P70178 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Six5P70178 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Six5P70178 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Six5P70178 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Six5P70178 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Six5P70178 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Six5P70178 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Six5P70178 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC15.33■□□□□ 0.04
Six5P70178 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Six5P70178 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Six5P70178 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.33■□□□□ 0.04
Six5P70178 Gm25016-201ENSMUST00000158399 131 ntBASIC15.33■□□□□ 0.04
Six5P70178 Gm6659-201ENSMUST00000174752 547 ntBASIC15.33■□□□□ 0.04
Six5P70178 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Six5P70178 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Six5P70178 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Six5P70178 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Six5P70178 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC15.33■□□□□ 0.04
Six5P70178 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Six5P70178 Gm45774-201ENSMUST00000211992 2665 ntBASIC15.33■□□□□ 0.04
Six5P70178 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.33■□□□□ 0.04
Six5P70178 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Six5P70178 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Six5P70178 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Six5P70178 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Six5P70178 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms