Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rpl39P62892 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rpl39P62892 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rpl39P62892 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rpl39P62892 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Rpl39P62892 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rpl39P62892 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rpl39P62892 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rpl39P62892 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rpl39P62892 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rpl39P62892 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rpl39P62892 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rpl39P62892 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rpl39P62892 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rpl39P62892 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rpl39P62892 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rpl39P62892 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rpl39P62892 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
Rpl39P62892 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rpl39P62892 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rpl39P62892 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rpl39P62892 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rpl39P62892 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rpl39P62892 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rpl39P62892 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rpl39P62892 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rpl39P62892 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rpl39P62892 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rpl39P62892 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
Rpl39P62892 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rpl39P62892 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rpl39P62892 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rpl39P62892 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rpl39P62892 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC11.75□□□□□ -0.53
Rpl39P62892 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rpl39P62892 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Rpl39P62892 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
Rpl39P62892 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rpl39P62892 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rpl39P62892 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rpl39P62892 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rpl39P62892 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rpl39P62892 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rpl39P62892 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rpl39P62892 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC11.75□□□□□ -0.53
Rpl39P62892 Alkbh1-212ENSMUST00000185301 408 ntBASIC11.75□□□□□ -0.53
Rpl39P62892 Gm44672-201ENSMUST00000206944 1098 ntBASIC11.75□□□□□ -0.53
Rpl39P62892 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rpl39P62892 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rpl39P62892 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
Rpl39P62892 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rpl39P62892 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rpl39P62892 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rpl39P62892 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rpl39P62892 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rpl39P62892 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rpl39P62892 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rpl39P62892 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rpl39P62892 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rpl39P62892 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rpl39P62892 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rpl39P62892 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rpl39P62892 AC115863.1-201ENSMUST00000214815 1813 ntBASIC11.74□□□□□ -0.53
Rpl39P62892 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rpl39P62892 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rpl39P62892 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rpl39P62892 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rpl39P62892 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rpl39P62892 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rpl39P62892 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rpl39P62892 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rpl39P62892 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC11.74□□□□□ -0.53
Rpl39P62892 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rpl39P62892 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC11.74□□□□□ -0.53
Rpl39P62892 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC11.74□□□□□ -0.53
Rpl39P62892 Gm4974-201ENSMUST00000209974 875 ntBASIC11.74□□□□□ -0.53
Rpl39P62892 AC166341.7-201ENSMUST00000221698 126 ntBASIC11.74□□□□□ -0.53
Rpl39P62892 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rpl39P62892 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rpl39P62892 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rpl39P62892 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
Rpl39P62892 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rpl39P62892 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rpl39P62892 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Rpl39P62892 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rpl39P62892 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC11.74□□□□□ -0.53
Rpl39P62892 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rpl39P62892 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rpl39P62892 AC153526.5-201ENSMUST00000218661 2147 ntBASIC11.74□□□□□ -0.53
Rpl39P62892 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC11.74□□□□□ -0.53
Rpl39P62892 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rpl39P62892 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rpl39P62892 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rpl39P62892 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rpl39P62892 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Rpl39P62892 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Rpl39P62892 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rpl39P62892 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Rpl39P62892 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rpl39P62892 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms