Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Lsm5P62322 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lsm5P62322 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Lsm5P62322 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC13.75□□□□□ -0.21
Lsm5P62322 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC13.75□□□□□ -0.21
Lsm5P62322 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC13.75□□□□□ -0.21
Lsm5P62322 Gm2011-201ENSMUST00000203124 1263 ntBASIC13.75□□□□□ -0.21
Lsm5P62322 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC13.75□□□□□ -0.21
Lsm5P62322 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lsm5P62322 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lsm5P62322 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lsm5P62322 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lsm5P62322 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Lsm5P62322 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lsm5P62322 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lsm5P62322 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lsm5P62322 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC13.74□□□□□ -0.21
Lsm5P62322 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lsm5P62322 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Lsm5P62322 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Lsm5P62322 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lsm5P62322 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Lsm5P62322 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
Lsm5P62322 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC13.74□□□□□ -0.21
Lsm5P62322 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Lsm5P62322 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lsm5P62322 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Lsm5P62322 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Lsm5P62322 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lsm5P62322 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Lsm5P62322 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lsm5P62322 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lsm5P62322 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lsm5P62322 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.74□□□□□ -0.21
Lsm5P62322 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC13.74□□□□□ -0.21
Lsm5P62322 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lsm5P62322 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lsm5P62322 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC13.74□□□□□ -0.21
Lsm5P62322 AL590614.2-201ENSMUST00000225374 1937 ntBASIC13.74□□□□□ -0.21
Lsm5P62322 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lsm5P62322 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Lsm5P62322 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Lsm5P62322 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Lsm5P62322 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lsm5P62322 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lsm5P62322 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lsm5P62322 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lsm5P62322 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lsm5P62322 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Lsm5P62322 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lsm5P62322 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lsm5P62322 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lsm5P62322 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lsm5P62322 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC13.73□□□□□ -0.21
Lsm5P62322 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Lsm5P62322 Gm6576-201ENSMUST00000169678 883 ntBASIC13.73□□□□□ -0.21
Lsm5P62322 Gm44549-201ENSMUST00000208351 577 ntBASIC13.73□□□□□ -0.21
Lsm5P62322 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lsm5P62322 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lsm5P62322 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lsm5P62322 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Lsm5P62322 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Lsm5P62322 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
Lsm5P62322 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lsm5P62322 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lsm5P62322 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lsm5P62322 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lsm5P62322 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lsm5P62322 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Lsm5P62322 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lsm5P62322 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Lsm5P62322 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lsm5P62322 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC13.72□□□□□ -0.21
Lsm5P62322 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lsm5P62322 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lsm5P62322 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lsm5P62322 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Lsm5P62322 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Lsm5P62322 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lsm5P62322 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Lsm5P62322 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lsm5P62322 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Lsm5P62322 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Lsm5P62322 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Lsm5P62322 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lsm5P62322 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lsm5P62322 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lsm5P62322 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Lsm5P62322 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC13.72□□□□□ -0.21
Lsm5P62322 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lsm5P62322 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lsm5P62322 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
Lsm5P62322 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC13.72□□□□□ -0.21
Lsm5P62322 AC099934.2-201ENSMUST00000196389 70 ntBASIC13.72□□□□□ -0.21
Lsm5P62322 AC156953.1-201ENSMUST00000196953 70 ntBASIC13.72□□□□□ -0.21
Lsm5P62322 AC157822.2-201ENSMUST00000200291 70 ntBASIC13.72□□□□□ -0.21
Lsm5P62322 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC13.72□□□□□ -0.21
Lsm5P62322 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lsm5P62322 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lsm5P62322 Gm6365-201ENSMUST00000054711 744 ntBASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 12.3 ms