Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tubgcp3P58854 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Tubgcp3P58854 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Tubgcp3P58854 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Tubgcp3P58854 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tubgcp3P58854 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tubgcp3P58854 Gm45058-201ENSMUST00000205810 766 ntBASIC16.77■□□□□ 0.28
Tubgcp3P58854 Gm18959-201ENSMUST00000208954 655 ntBASIC16.77■□□□□ 0.28
Tubgcp3P58854 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tubgcp3P58854 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tubgcp3P58854 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tubgcp3P58854 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tubgcp3P58854 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Tubgcp3P58854 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Tubgcp3P58854 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Tubgcp3P58854 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.77■□□□□ 0.28
Tubgcp3P58854 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Tubgcp3P58854 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Tubgcp3P58854 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Tubgcp3P58854 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Tubgcp3P58854 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Tubgcp3P58854 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Tubgcp3P58854 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tubgcp3P58854 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tubgcp3P58854 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Tubgcp3P58854 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tubgcp3P58854 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tubgcp3P58854 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tubgcp3P58854 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tubgcp3P58854 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tubgcp3P58854 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Tubgcp3P58854 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tubgcp3P58854 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Tubgcp3P58854 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Tubgcp3P58854 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
Tubgcp3P58854 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.76■□□□□ 0.27
Tubgcp3P58854 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.76■□□□□ 0.27
Tubgcp3P58854 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tubgcp3P58854 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Tubgcp3P58854 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tubgcp3P58854 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.76■□□□□ 0.27
Tubgcp3P58854 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.76■□□□□ 0.27
Tubgcp3P58854 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tubgcp3P58854 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tubgcp3P58854 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tubgcp3P58854 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.76■□□□□ 0.27
Tubgcp3P58854 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tubgcp3P58854 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tubgcp3P58854 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tubgcp3P58854 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Tubgcp3P58854 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16.76■□□□□ 0.27
Tubgcp3P58854 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Tubgcp3P58854 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tubgcp3P58854 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Tubgcp3P58854 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Tubgcp3P58854 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tubgcp3P58854 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tubgcp3P58854 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Tubgcp3P58854 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Tubgcp3P58854 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tubgcp3P58854 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tubgcp3P58854 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Tubgcp3P58854 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tubgcp3P58854 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.75■□□□□ 0.27
Tubgcp3P58854 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Tubgcp3P58854 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC16.75■□□□□ 0.27
Tubgcp3P58854 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Tubgcp3P58854 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Tubgcp3P58854 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.75■□□□□ 0.27
Tubgcp3P58854 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tubgcp3P58854 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Tubgcp3P58854 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tubgcp3P58854 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.75■□□□□ 0.27
Tubgcp3P58854 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Tubgcp3P58854 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.75■□□□□ 0.27
Tubgcp3P58854 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tubgcp3P58854 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tubgcp3P58854 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Tubgcp3P58854 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tubgcp3P58854 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tubgcp3P58854 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.74■□□□□ 0.27
Tubgcp3P58854 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Tubgcp3P58854 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tubgcp3P58854 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tubgcp3P58854 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tubgcp3P58854 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.74■□□□□ 0.27
Tubgcp3P58854 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.74■□□□□ 0.27
Tubgcp3P58854 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Tubgcp3P58854 Mir1668-201ENSMUST00000184114 107 ntBASIC16.74■□□□□ 0.27
Tubgcp3P58854 Gm44450-201ENSMUST00000199528 114 ntBASIC16.74■□□□□ 0.27
Tubgcp3P58854 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.74■□□□□ 0.27
Tubgcp3P58854 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tubgcp3P58854 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tubgcp3P58854 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Tubgcp3P58854 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.74■□□□□ 0.27
Tubgcp3P58854 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tubgcp3P58854 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Tubgcp3P58854 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Tubgcp3P58854 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
Tubgcp3P58854 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms