Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Tpm1P58771 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Tpm1P58771 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tpm1P58771 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
Tpm1P58771 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tpm1P58771 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tpm1P58771 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Tpm1P58771 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tpm1P58771 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Tpm1P58771 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC18.36■□□□□ 0.53
Tpm1P58771 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tpm1P58771 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.36■□□□□ 0.53
Tpm1P58771 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tpm1P58771 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.36■□□□□ 0.53
Tpm1P58771 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Tpm1P58771 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tpm1P58771 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tpm1P58771 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tpm1P58771 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tpm1P58771 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Tpm1P58771 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tpm1P58771 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
Tpm1P58771 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tpm1P58771 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC18.36■□□□□ 0.53
Tpm1P58771 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Tpm1P58771 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tpm1P58771 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
Tpm1P58771 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tpm1P58771 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Tpm1P58771 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tpm1P58771 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tpm1P58771 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tpm1P58771 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC18.35■□□□□ 0.53
Tpm1P58771 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tpm1P58771 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Tpm1P58771 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.35■□□□□ 0.53
Tpm1P58771 Gm17661-201ENSMUST00000170317 270 ntBASIC18.35■□□□□ 0.53
Tpm1P58771 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.35■□□□□ 0.53
Tpm1P58771 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.35■□□□□ 0.53
Tpm1P58771 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tpm1P58771 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tpm1P58771 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tpm1P58771 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tpm1P58771 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tpm1P58771 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tpm1P58771 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
Tpm1P58771 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Tpm1P58771 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Tpm1P58771 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Tpm1P58771 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tpm1P58771 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Tpm1P58771 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Tpm1P58771 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tpm1P58771 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tpm1P58771 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Tpm1P58771 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.34■□□□□ 0.53
Tpm1P58771 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tpm1P58771 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Tpm1P58771 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Tpm1P58771 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tpm1P58771 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tpm1P58771 Gm37292-201ENSMUST00000192062 758 ntBASIC18.34■□□□□ 0.53
Tpm1P58771 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.34■□□□□ 0.53
Tpm1P58771 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC18.34■□□□□ 0.53
Tpm1P58771 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Tpm1P58771 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tpm1P58771 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC18.34■□□□□ 0.53
Tpm1P58771 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC18.34■□□□□ 0.53
Tpm1P58771 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tpm1P58771 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Tpm1P58771 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tpm1P58771 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Tpm1P58771 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Tpm1P58771 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tpm1P58771 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tpm1P58771 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.33■□□□□ 0.53
Tpm1P58771 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tpm1P58771 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tpm1P58771 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tpm1P58771 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Tpm1P58771 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tpm1P58771 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tpm1P58771 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.33■□□□□ 0.52
Tpm1P58771 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tpm1P58771 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Tpm1P58771 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Tpm1P58771 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tpm1P58771 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tpm1P58771 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tpm1P58771 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tpm1P58771 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tpm1P58771 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tpm1P58771 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tpm1P58771 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tpm1P58771 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC18.33■□□□□ 0.52
Tpm1P58771 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Tpm1P58771 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Tpm1P58771 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tpm1P58771 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Tpm1P58771 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms