Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NrlP54846 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NrlP54846 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NrlP54846 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NrlP54846 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.45■□□□□ 0.38
NrlP54846 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NrlP54846 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NrlP54846 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
NrlP54846 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.45■□□□□ 0.38
NrlP54846 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NrlP54846 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NrlP54846 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NrlP54846 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NrlP54846 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NrlP54846 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NrlP54846 Gm7862-201ENSMUST00000121461 292 ntBASIC17.44■□□□□ 0.38
NrlP54846 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NrlP54846 Gm27867-201ENSMUST00000184778 125 ntBASIC17.44■□□□□ 0.38
NrlP54846 Gm44430-201ENSMUST00000203376 995 ntBASIC17.44■□□□□ 0.38
NrlP54846 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC17.44■□□□□ 0.38
NrlP54846 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NrlP54846 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NrlP54846 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NrlP54846 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NrlP54846 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.44■□□□□ 0.38
NrlP54846 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NrlP54846 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NrlP54846 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
NrlP54846 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NrlP54846 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NrlP54846 Gm27525-201ENSMUST00000184465 107 ntBASIC17.43■□□□□ 0.38
NrlP54846 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NrlP54846 Gm13830-205ENSMUST00000201195 1155 ntBASIC17.43■□□□□ 0.38
NrlP54846 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC17.43■□□□□ 0.38
NrlP54846 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17.43■□□□□ 0.38
NrlP54846 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NrlP54846 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NrlP54846 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NrlP54846 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
NrlP54846 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NrlP54846 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NrlP54846 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NrlP54846 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NrlP54846 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
NrlP54846 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NrlP54846 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NrlP54846 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
NrlP54846 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
NrlP54846 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC17.42■□□□□ 0.38
NrlP54846 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
NrlP54846 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NrlP54846 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NrlP54846 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
NrlP54846 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NrlP54846 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NrlP54846 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NrlP54846 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.42■□□□□ 0.38
NrlP54846 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
NrlP54846 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NrlP54846 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NrlP54846 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NrlP54846 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NrlP54846 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
NrlP54846 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
NrlP54846 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NrlP54846 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NrlP54846 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
NrlP54846 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
NrlP54846 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
NrlP54846 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.41■□□□□ 0.38
NrlP54846 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NrlP54846 Gm5712-201ENSMUST00000199748 1043 ntBASIC17.41■□□□□ 0.38
NrlP54846 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NrlP54846 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NrlP54846 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC17.41■□□□□ 0.38
NrlP54846 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NrlP54846 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NrlP54846 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC17.41■□□□□ 0.38
NrlP54846 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NrlP54846 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NrlP54846 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NrlP54846 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
NrlP54846 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NrlP54846 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
NrlP54846 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
NrlP54846 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NrlP54846 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.4■□□□□ 0.38
NrlP54846 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NrlP54846 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NrlP54846 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NrlP54846 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
NrlP54846 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC17.4■□□□□ 0.38
NrlP54846 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
NrlP54846 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NrlP54846 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC17.4■□□□□ 0.38
NrlP54846 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC17.4■□□□□ 0.38
NrlP54846 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NrlP54846 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC17.4■□□□□ 0.38
NrlP54846 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC17.4■□□□□ 0.38
NrlP54846 AC138767.1-201ENSMUST00000222661 415 ntBASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms