Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC20.75■□□□□ 0.91
Msh6P54276 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Msh6P54276 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Msh6P54276 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Msh6P54276 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Msh6P54276 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Msh6P54276 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Msh6P54276 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Msh6P54276 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Msh6P54276 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Msh6P54276 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Msh6P54276 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Msh6P54276 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Msh6P54276 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Msh6P54276 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC20.74■□□□□ 0.91
Msh6P54276 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Msh6P54276 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Msh6P54276 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Msh6P54276 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
Msh6P54276 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Msh6P54276 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Msh6P54276 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Msh6P54276 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Msh6P54276 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Msh6P54276 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Msh6P54276 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC20.74■□□□□ 0.91
Msh6P54276 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Msh6P54276 Gm23935-201ENSMUST00000102303 57 ntBASIC20.73■□□□□ 0.91
Msh6P54276 Gm24270-201ENSMUST00000102326 57 ntBASIC20.73■□□□□ 0.91
Msh6P54276 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC20.73■□□□□ 0.91
Msh6P54276 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Msh6P54276 Gm24245-201ENSMUST00000157318 57 ntBASIC20.73■□□□□ 0.91
Msh6P54276 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC20.73■□□□□ 0.91
Msh6P54276 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Msh6P54276 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC20.73■□□□□ 0.91
Msh6P54276 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Msh6P54276 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Msh6P54276 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Msh6P54276 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Msh6P54276 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Msh6P54276 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Msh6P54276 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.73■□□□□ 0.91
Msh6P54276 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Msh6P54276 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
Msh6P54276 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Msh6P54276 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Msh6P54276 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Msh6P54276 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Msh6P54276 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Msh6P54276 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Msh6P54276 Gm15173-201ENSMUST00000122049 433 ntBASIC20.72■□□□□ 0.91
Msh6P54276 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Msh6P54276 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Msh6P54276 Gm6736-201ENSMUST00000166583 948 ntBASIC20.72■□□□□ 0.91
Msh6P54276 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Msh6P54276 Gm2756-201ENSMUST00000195851 400 ntBASIC20.72■□□□□ 0.91
Msh6P54276 AC154222.1-201ENSMUST00000223882 475 ntBASIC20.72■□□□□ 0.91
Msh6P54276 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Msh6P54276 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Msh6P54276 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Msh6P54276 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Msh6P54276 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Msh6P54276 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Msh6P54276 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Msh6P54276 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Msh6P54276 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Msh6P54276 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Msh6P54276 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Msh6P54276 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC20.72■□□□□ 0.91
Msh6P54276 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
Msh6P54276 Gm14494-201ENSMUST00000118786 435 ntBASIC20.72■□□□□ 0.91
Msh6P54276 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Msh6P54276 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Msh6P54276 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC20.72■□□□□ 0.91
Msh6P54276 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC20.72■□□□□ 0.91
Msh6P54276 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Msh6P54276 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC20.72■□□□□ 0.91
Msh6P54276 AV026068-213ENSMUST00000223675 1171 ntBASIC20.72■□□□□ 0.91
Msh6P54276 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Msh6P54276 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Msh6P54276 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Msh6P54276 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Msh6P54276 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Msh6P54276 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Msh6P54276 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Msh6P54276 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Msh6P54276 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Msh6P54276 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Msh6P54276 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Msh6P54276 Gm14140-201ENSMUST00000119999 995 ntBASIC20.71■□□□□ 0.91
Msh6P54276 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC20.71■□□□□ 0.91
Msh6P54276 Gm8349-201ENSMUST00000182720 1003 ntBASIC20.71■□□□□ 0.91
Msh6P54276 Gm37584-201ENSMUST00000193595 1290 ntBASIC20.71■□□□□ 0.91
Msh6P54276 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Msh6P54276 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Msh6P54276 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Msh6P54276 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC20.7■□□□□ 0.9
Msh6P54276 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Msh6P54276 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Msh6P54276 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms