Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sox18P43680 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sox18P43680 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sox18P43680 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sox18P43680 Gm44450-201ENSMUST00000199528 114 ntBASIC15.71■□□□□ 0.11
Sox18P43680 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sox18P43680 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sox18P43680 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Sox18P43680 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
Sox18P43680 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sox18P43680 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Sox18P43680 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Sox18P43680 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sox18P43680 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Sox18P43680 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
Sox18P43680 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
Sox18P43680 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC15.71■□□□□ 0.1
Sox18P43680 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Sox18P43680 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Sox18P43680 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Sox18P43680 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Sox18P43680 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Sox18P43680 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sox18P43680 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC15.7■□□□□ 0.1
Sox18P43680 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Sox18P43680 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Sox18P43680 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sox18P43680 Gm25911-201ENSMUST00000157621 56 ntBASIC15.7■□□□□ 0.1
Sox18P43680 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sox18P43680 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Sox18P43680 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC15.7■□□□□ 0.1
Sox18P43680 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sox18P43680 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Sox18P43680 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sox18P43680 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sox18P43680 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Sox18P43680 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC15.7■□□□□ 0.1
Sox18P43680 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sox18P43680 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Sox18P43680 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sox18P43680 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sox18P43680 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Sox18P43680 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Sox18P43680 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sox18P43680 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox18P43680 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Sox18P43680 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox18P43680 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox18P43680 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox18P43680 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox18P43680 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Sox18P43680 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox18P43680 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox18P43680 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox18P43680 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC15.69■□□□□ 0.1
Sox18P43680 Gm18421-201ENSMUST00000204122 625 ntBASIC15.69■□□□□ 0.1
Sox18P43680 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC15.69■□□□□ 0.1
Sox18P43680 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox18P43680 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox18P43680 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox18P43680 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
Sox18P43680 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox18P43680 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sox18P43680 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Sox18P43680 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sox18P43680 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Sox18P43680 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC15.68■□□□□ 0.1
Sox18P43680 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sox18P43680 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sox18P43680 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sox18P43680 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sox18P43680 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sox18P43680 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sox18P43680 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sox18P43680 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sox18P43680 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sox18P43680 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Sox18P43680 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sox18P43680 Gm8969-201ENSMUST00000199694 526 ntBASIC15.68■□□□□ 0.1
Sox18P43680 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC15.68■□□□□ 0.1
Sox18P43680 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sox18P43680 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sox18P43680 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sox18P43680 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC15.68■□□□□ 0.1
Sox18P43680 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sox18P43680 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sox18P43680 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sox18P43680 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Sox18P43680 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC15.68■□□□□ 0.1
Sox18P43680 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sox18P43680 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sox18P43680 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Sox18P43680 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sox18P43680 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sox18P43680 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Sox18P43680 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sox18P43680 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Sox18P43680 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sox18P43680 AC125311.2-201ENSMUST00000227477 1940 ntBASIC15.67■□□□□ 0.1
Sox18P43680 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms