Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HttP42859 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HttP42859 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
HttP42859 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HttP42859 AC119177.1-201ENSMUST00000227647 1332 ntBASIC17.47■□□□□ 0.39
HttP42859 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC17.47■□□□□ 0.39
HttP42859 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HttP42859 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC17.47■□□□□ 0.39
HttP42859 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
HttP42859 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HttP42859 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HttP42859 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC17.47■□□□□ 0.39
HttP42859 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HttP42859 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.47■□□□□ 0.39
HttP42859 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HttP42859 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.47■□□□□ 0.39
HttP42859 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
HttP42859 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
HttP42859 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HttP42859 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HttP42859 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC17.46■□□□□ 0.39
HttP42859 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC17.46■□□□□ 0.39
HttP42859 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HttP42859 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC17.46■□□□□ 0.39
HttP42859 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HttP42859 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
HttP42859 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HttP42859 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
HttP42859 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
HttP42859 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC17.45■□□□□ 0.38
HttP42859 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HttP42859 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HttP42859 Best4-ps-201ENSMUST00000129783 1380 ntBASIC17.45■□□□□ 0.38
HttP42859 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.45■□□□□ 0.38
HttP42859 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
HttP42859 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HttP42859 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
HttP42859 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HttP42859 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
HttP42859 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
HttP42859 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC17.45■□□□□ 0.38
HttP42859 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
HttP42859 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC17.45■□□□□ 0.38
HttP42859 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HttP42859 Gm37153-201ENSMUST00000193637 231 ntBASIC17.45■□□□□ 0.38
HttP42859 AC114585.2-202ENSMUST00000228094 426 ntBASIC17.45■□□□□ 0.38
HttP42859 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
HttP42859 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HttP42859 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HttP42859 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
HttP42859 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
HttP42859 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HttP42859 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HttP42859 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HttP42859 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HttP42859 Gm45167-201ENSMUST00000208007 322 ntBASIC17.44■□□□□ 0.38
HttP42859 AC127302.2-201ENSMUST00000215212 268 ntBASIC17.44■□□□□ 0.38
HttP42859 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HttP42859 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
HttP42859 CT025626.1-201ENSMUST00000223735 1455 ntBASIC17.44■□□□□ 0.38
HttP42859 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HttP42859 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HttP42859 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HttP42859 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HttP42859 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HttP42859 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HttP42859 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.43■□□□□ 0.38
HttP42859 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HttP42859 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HttP42859 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HttP42859 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.43■□□□□ 0.38
HttP42859 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HttP42859 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
HttP42859 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HttP42859 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
HttP42859 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
HttP42859 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HttP42859 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
HttP42859 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC17.43■□□□□ 0.38
HttP42859 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HttP42859 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HttP42859 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HttP42859 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HttP42859 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HttP42859 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
HttP42859 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HttP42859 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC17.43■□□□□ 0.38
HttP42859 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC17.43■□□□□ 0.38
HttP42859 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC17.43■□□□□ 0.38
HttP42859 Rprl2-201ENSMUST00000157150 290 ntBASIC17.43■□□□□ 0.38
HttP42859 Gm27306-201ENSMUST00000183970 107 ntBASIC17.43■□□□□ 0.38
HttP42859 Gm43125-201ENSMUST00000201724 730 ntBASIC17.43■□□□□ 0.38
HttP42859 Gm20553-201ENSMUST00000204205 844 ntBASIC17.43■□□□□ 0.38
HttP42859 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HttP42859 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HttP42859 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.43■□□□□ 0.38
HttP42859 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HttP42859 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HttP42859 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HttP42859 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms