Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cdh4P39038 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC15.71■□□□□ 0.11
Cdh4P39038 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cdh4P39038 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC15.71■□□□□ 0.11
Cdh4P39038 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC15.71■□□□□ 0.11
Cdh4P39038 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC15.71■□□□□ 0.11
Cdh4P39038 Gm33142-201ENSMUST00000193913 867 ntBASIC15.71■□□□□ 0.11
Cdh4P39038 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC15.71■□□□□ 0.11
Cdh4P39038 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Cdh4P39038 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cdh4P39038 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Cdh4P39038 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cdh4P39038 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cdh4P39038 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC15.71■□□□□ 0.11
Cdh4P39038 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cdh4P39038 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cdh4P39038 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cdh4P39038 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC15.71■□□□□ 0.11
Cdh4P39038 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cdh4P39038 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cdh4P39038 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cdh4P39038 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cdh4P39038 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cdh4P39038 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdh4P39038 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdh4P39038 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC15.7■□□□□ 0.1
Cdh4P39038 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Cdh4P39038 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdh4P39038 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdh4P39038 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdh4P39038 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdh4P39038 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdh4P39038 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Cdh4P39038 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdh4P39038 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdh4P39038 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC15.7■□□□□ 0.1
Cdh4P39038 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
Cdh4P39038 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC15.7■□□□□ 0.1
Cdh4P39038 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdh4P39038 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdh4P39038 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdh4P39038 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cdh4P39038 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdh4P39038 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdh4P39038 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC15.69■□□□□ 0.1
Cdh4P39038 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdh4P39038 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdh4P39038 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cdh4P39038 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC15.69■□□□□ 0.1
Cdh4P39038 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cdh4P39038 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdh4P39038 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Cdh4P39038 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdh4P39038 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdh4P39038 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdh4P39038 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdh4P39038 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdh4P39038 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdh4P39038 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdh4P39038 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cdh4P39038 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC15.69■□□□□ 0.1
Cdh4P39038 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cdh4P39038 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Cdh4P39038 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.69■□□□□ 0.1
Cdh4P39038 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdh4P39038 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Cdh4P39038 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Cdh4P39038 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdh4P39038 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdh4P39038 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cdh4P39038 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cdh4P39038 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Cdh4P39038 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdh4P39038 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC15.68■□□□□ 0.1
Cdh4P39038 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdh4P39038 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdh4P39038 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdh4P39038 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdh4P39038 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdh4P39038 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdh4P39038 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Cdh4P39038 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Cdh4P39038 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Cdh4P39038 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cdh4P39038 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Cdh4P39038 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdh4P39038 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdh4P39038 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdh4P39038 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
Cdh4P39038 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
Cdh4P39038 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdh4P39038 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdh4P39038 Haglr-201ENSMUST00000100000 2085 ntBASIC15.67■□□□□ 0.1
Cdh4P39038 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdh4P39038 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdh4P39038 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdh4P39038 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cdh4P39038 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdh4P39038 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdh4P39038 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 83.4 ms