Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.83■□□□□ 0.28
Mmp13P33435 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Mmp13P33435 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Mmp13P33435 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Mmp13P33435 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Mmp13P33435 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Mmp13P33435 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Mmp13P33435 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Mmp13P33435 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Mmp13P33435 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mmp13P33435 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Mmp13P33435 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mmp13P33435 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mmp13P33435 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.82■□□□□ 0.28
Mmp13P33435 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mmp13P33435 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Mmp13P33435 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mmp13P33435 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mmp13P33435 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mmp13P33435 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mmp13P33435 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.82■□□□□ 0.28
Mmp13P33435 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.82■□□□□ 0.28
Mmp13P33435 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Mmp13P33435 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Mmp13P33435 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
Mmp13P33435 Gm2274-201ENSMUST00000184539 609 ntBASIC16.82■□□□□ 0.28
Mmp13P33435 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.82■□□□□ 0.28
Mmp13P33435 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Mmp13P33435 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC16.82■□□□□ 0.28
Mmp13P33435 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mmp13P33435 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mmp13P33435 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mmp13P33435 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mmp13P33435 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mmp13P33435 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Mmp13P33435 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Mmp13P33435 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Mmp13P33435 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Mmp13P33435 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Mmp13P33435 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.81■□□□□ 0.28
Mmp13P33435 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Mmp13P33435 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC16.81■□□□□ 0.28
Mmp13P33435 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Mmp13P33435 Gm18959-201ENSMUST00000208954 655 ntBASIC16.81■□□□□ 0.28
Mmp13P33435 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.81■□□□□ 0.28
Mmp13P33435 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Mmp13P33435 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Mmp13P33435 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Mmp13P33435 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Mmp13P33435 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Mmp13P33435 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Mmp13P33435 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.81■□□□□ 0.28
Mmp13P33435 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Mmp13P33435 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Mmp13P33435 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.81■□□□□ 0.28
Mmp13P33435 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Mmp13P33435 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Mmp13P33435 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Mmp13P33435 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Mmp13P33435 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Mmp13P33435 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Mmp13P33435 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Mmp13P33435 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Mmp13P33435 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Mmp13P33435 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mmp13P33435 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mmp13P33435 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mmp13P33435 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mmp13P33435 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mmp13P33435 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Mmp13P33435 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mmp13P33435 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mmp13P33435 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Mmp13P33435 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mmp13P33435 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.8■□□□□ 0.28
Mmp13P33435 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.8■□□□□ 0.28
Mmp13P33435 Gm9731-201ENSMUST00000209480 747 ntBASIC16.8■□□□□ 0.28
Mmp13P33435 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mmp13P33435 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mmp13P33435 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mmp13P33435 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mmp13P33435 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mmp13P33435 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mmp13P33435 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mmp13P33435 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mmp13P33435 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mmp13P33435 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Mmp13P33435 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mmp13P33435 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.79■□□□□ 0.28
Mmp13P33435 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Mmp13P33435 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Mmp13P33435 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mmp13P33435 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mmp13P33435 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mmp13P33435 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mmp13P33435 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Mmp13P33435 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
Mmp13P33435 Gm7791-201ENSMUST00000219066 539 ntBASIC16.79■□□□□ 0.28
Mmp13P33435 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mmp13P33435 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms