Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Slc6a11P31650 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Slc6a11P31650 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
Slc6a11P31650 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Slc6a11P31650 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Slc6a11P31650 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Slc6a11P31650 Gm6345-202ENSMUST00000180900 204 ntBASIC15.6■□□□□ 0.09
Slc6a11P31650 Gm27463-201ENSMUST00000183569 57 ntBASIC15.6■□□□□ 0.09
Slc6a11P31650 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Slc6a11P31650 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Slc6a11P31650 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Slc6a11P31650 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Slc6a11P31650 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Slc6a11P31650 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Slc6a11P31650 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Slc6a11P31650 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Slc6a11P31650 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Slc6a11P31650 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Slc6a11P31650 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Slc6a11P31650 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Slc6a11P31650 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Slc6a11P31650 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Slc6a11P31650 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Slc6a11P31650 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Slc6a11P31650 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Slc6a11P31650 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Slc6a11P31650 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Slc6a11P31650 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC15.59■□□□□ 0.09
Slc6a11P31650 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Slc6a11P31650 Gm45058-201ENSMUST00000205810 766 ntBASIC15.59■□□□□ 0.09
Slc6a11P31650 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Slc6a11P31650 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Slc6a11P31650 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Slc6a11P31650 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Slc6a11P31650 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Slc6a11P31650 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Slc6a11P31650 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Slc6a11P31650 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Slc6a11P31650 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Slc6a11P31650 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Slc6a11P31650 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Slc6a11P31650 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC15.59■□□□□ 0.09
Slc6a11P31650 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Slc6a11P31650 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Slc6a11P31650 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Slc6a11P31650 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Slc6a11P31650 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Slc6a11P31650 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Slc6a11P31650 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
Slc6a11P31650 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Slc6a11P31650 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Slc6a11P31650 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC15.58■□□□□ 0.08
Slc6a11P31650 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Slc6a11P31650 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC15.58■□□□□ 0.08
Slc6a11P31650 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC15.58■□□□□ 0.08
Slc6a11P31650 Gm18032-201ENSMUST00000222541 538 ntBASIC15.58■□□□□ 0.08
Slc6a11P31650 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Slc6a11P31650 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Slc6a11P31650 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Slc6a11P31650 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Slc6a11P31650 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Slc6a11P31650 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Slc6a11P31650 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Slc6a11P31650 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Slc6a11P31650 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Slc6a11P31650 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Slc6a11P31650 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Slc6a11P31650 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Slc6a11P31650 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Slc6a11P31650 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
Slc6a11P31650 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Slc6a11P31650 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Slc6a11P31650 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC15.57■□□□□ 0.08
Slc6a11P31650 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Slc6a11P31650 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Slc6a11P31650 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Slc6a11P31650 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Slc6a11P31650 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Slc6a11P31650 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Slc6a11P31650 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Slc6a11P31650 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Slc6a11P31650 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Slc6a11P31650 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Slc6a11P31650 Gm45203-201ENSMUST00000206384 1831 ntBASIC15.57■□□□□ 0.08
Slc6a11P31650 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Slc6a11P31650 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Slc6a11P31650 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Slc6a11P31650 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC15.56■□□□□ 0.08
Slc6a11P31650 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Slc6a11P31650 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.56■□□□□ 0.08
Slc6a11P31650 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
Slc6a11P31650 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Slc6a11P31650 Gm9103-201ENSMUST00000119371 405 ntBASIC15.56■□□□□ 0.08
Slc6a11P31650 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC15.56■□□□□ 0.08
Slc6a11P31650 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC15.56■□□□□ 0.08
Slc6a11P31650 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Slc6a11P31650 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC15.56■□□□□ 0.08
Slc6a11P31650 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC15.56■□□□□ 0.08
Slc6a11P31650 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Slc6a11P31650 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC15.56■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms