Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nedd8P29595 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nedd8P29595 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Nedd8P29595 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nedd8P29595 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nedd8P29595 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nedd8P29595 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nedd8P29595 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC15.27■□□□□ 0.04
Nedd8P29595 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nedd8P29595 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nedd8P29595 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Nedd8P29595 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nedd8P29595 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nedd8P29595 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nedd8P29595 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nedd8P29595 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Nedd8P29595 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nedd8P29595 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC15.27■□□□□ 0.04
Nedd8P29595 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nedd8P29595 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nedd8P29595 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC15.27■□□□□ 0.04
Nedd8P29595 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nedd8P29595 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nedd8P29595 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nedd8P29595 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Nedd8P29595 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nedd8P29595 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Nedd8P29595 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Nedd8P29595 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Nedd8P29595 Gm42901-201ENSMUST00000197735 3171 ntBASIC15.27■□□□□ 0.03
Nedd8P29595 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nedd8P29595 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nedd8P29595 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nedd8P29595 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nedd8P29595 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Nedd8P29595 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nedd8P29595 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nedd8P29595 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nedd8P29595 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nedd8P29595 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nedd8P29595 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nedd8P29595 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Nedd8P29595 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nedd8P29595 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nedd8P29595 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nedd8P29595 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nedd8P29595 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nedd8P29595 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nedd8P29595 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nedd8P29595 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
Nedd8P29595 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nedd8P29595 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nedd8P29595 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nedd8P29595 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Nedd8P29595 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nedd8P29595 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Nedd8P29595 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nedd8P29595 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Nedd8P29595 Gm13234-201ENSMUST00000120010 747 ntBASIC15.25■□□□□ 0.03
Nedd8P29595 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nedd8P29595 Gm43017-201ENSMUST00000198296 752 ntBASIC15.25■□□□□ 0.03
Nedd8P29595 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Nedd8P29595 Gm6139-201ENSMUST00000079261 882 ntBASIC15.25■□□□□ 0.03
Nedd8P29595 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nedd8P29595 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nedd8P29595 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.25■□□□□ 0.03
Nedd8P29595 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nedd8P29595 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nedd8P29595 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nedd8P29595 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nedd8P29595 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nedd8P29595 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nedd8P29595 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC15.25■□□□□ 0.03
Nedd8P29595 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nedd8P29595 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Nedd8P29595 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Nedd8P29595 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nedd8P29595 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Nedd8P29595 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nedd8P29595 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nedd8P29595 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nedd8P29595 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nedd8P29595 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nedd8P29595 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Nedd8P29595 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nedd8P29595 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC15.24■□□□□ 0.03
Nedd8P29595 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nedd8P29595 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nedd8P29595 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nedd8P29595 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Nedd8P29595 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Nedd8P29595 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Nedd8P29595 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Nedd8P29595 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nedd8P29595 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nedd8P29595 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nedd8P29595 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nedd8P29595 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC15.23■□□□□ 0.03
Nedd8P29595 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nedd8P29595 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms