Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mmp3P28862 Gm7862-201ENSMUST00000121461 292 ntBASIC17.54■□□□□ 0.4
Mmp3P28862 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC17.54■□□□□ 0.4
Mmp3P28862 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC17.54■□□□□ 0.4
Mmp3P28862 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mmp3P28862 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC17.54■□□□□ 0.4
Mmp3P28862 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mmp3P28862 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.54■□□□□ 0.4
Mmp3P28862 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.54■□□□□ 0.4
Mmp3P28862 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Mmp3P28862 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mmp3P28862 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Mmp3P28862 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mmp3P28862 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mmp3P28862 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mmp3P28862 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mmp3P28862 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Mmp3P28862 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.53■□□□□ 0.4
Mmp3P28862 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mmp3P28862 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Mmp3P28862 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mmp3P28862 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mmp3P28862 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Mmp3P28862 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mmp3P28862 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC17.53■□□□□ 0.4
Mmp3P28862 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Mmp3P28862 Gm7506-201ENSMUST00000207758 815 ntBASIC17.53■□□□□ 0.4
Mmp3P28862 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC17.53■□□□□ 0.4
Mmp3P28862 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mmp3P28862 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mmp3P28862 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mmp3P28862 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Mmp3P28862 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mmp3P28862 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mmp3P28862 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.53■□□□□ 0.4
Mmp3P28862 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Mmp3P28862 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mmp3P28862 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mmp3P28862 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mmp3P28862 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mmp3P28862 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mmp3P28862 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mmp3P28862 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mmp3P28862 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mmp3P28862 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mmp3P28862 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Mmp3P28862 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.52■□□□□ 0.4
Mmp3P28862 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Mmp3P28862 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC17.52■□□□□ 0.4
Mmp3P28862 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mmp3P28862 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
Mmp3P28862 Gm9449-201ENSMUST00000207265 1011 ntBASIC17.52■□□□□ 0.4
Mmp3P28862 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mmp3P28862 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Mmp3P28862 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Mmp3P28862 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mmp3P28862 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Mmp3P28862 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Mmp3P28862 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Mmp3P28862 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Mmp3P28862 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Mmp3P28862 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Mmp3P28862 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Mmp3P28862 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Mmp3P28862 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Mmp3P28862 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Mmp3P28862 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Mmp3P28862 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC17.51■□□□□ 0.39
Mmp3P28862 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Mmp3P28862 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Mmp3P28862 Gm8349-201ENSMUST00000182720 1003 ntBASIC17.51■□□□□ 0.39
Mmp3P28862 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Mmp3P28862 Gm6443-201ENSMUST00000203599 874 ntBASIC17.51■□□□□ 0.39
Mmp3P28862 AW822252-206ENSMUST00000208904 237 ntBASIC17.51■□□□□ 0.39
Mmp3P28862 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Mmp3P28862 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Mmp3P28862 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Mmp3P28862 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Mmp3P28862 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Mmp3P28862 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Mmp3P28862 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Mmp3P28862 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Mmp3P28862 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Mmp3P28862 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Mmp3P28862 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Mmp3P28862 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Mmp3P28862 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Mmp3P28862 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC17.5■□□□□ 0.39
Mmp3P28862 Gm43514-201ENSMUST00000198852 424 ntBASIC17.5■□□□□ 0.39
Mmp3P28862 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Mmp3P28862 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Mmp3P28862 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC17.5■□□□□ 0.39
Mmp3P28862 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Mmp3P28862 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Mmp3P28862 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Mmp3P28862 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Mmp3P28862 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.49■□□□□ 0.39
Mmp3P28862 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Mmp3P28862 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Mmp3P28862 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms