Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cd40P27512 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cd40P27512 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cd40P27512 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cd40P27512 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Cd40P27512 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cd40P27512 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC14.85□□□□□ -0.03
Cd40P27512 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cd40P27512 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cd40P27512 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
Cd40P27512 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cd40P27512 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cd40P27512 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cd40P27512 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
Cd40P27512 Gm10052-201ENSMUST00000168019 960 ntBASIC14.85□□□□□ -0.03
Cd40P27512 Gm29518-201ENSMUST00000190858 372 ntBASIC14.85□□□□□ -0.03
Cd40P27512 Gm17808-201ENSMUST00000200859 894 ntBASIC14.85□□□□□ -0.03
Cd40P27512 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cd40P27512 Gm7729-201ENSMUST00000050143 801 ntBASIC14.85□□□□□ -0.03
Cd40P27512 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cd40P27512 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cd40P27512 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC14.85□□□□□ -0.03
Cd40P27512 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cd40P27512 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Cd40P27512 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cd40P27512 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cd40P27512 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cd40P27512 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cd40P27512 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cd40P27512 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cd40P27512 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cd40P27512 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC14.85□□□□□ -0.03
Cd40P27512 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cd40P27512 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
Cd40P27512 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cd40P27512 AC115863.1-201ENSMUST00000214815 1813 ntBASIC14.85□□□□□ -0.03
Cd40P27512 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Cd40P27512 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cd40P27512 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cd40P27512 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cd40P27512 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Cd40P27512 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cd40P27512 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cd40P27512 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cd40P27512 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cd40P27512 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cd40P27512 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cd40P27512 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cd40P27512 Zkscan4-202ENSMUST00000225845 1506 ntBASIC14.84□□□□□ -0.03
Cd40P27512 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cd40P27512 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
Cd40P27512 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cd40P27512 Gm44430-201ENSMUST00000203376 995 ntBASIC14.84□□□□□ -0.03
Cd40P27512 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cd40P27512 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cd40P27512 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cd40P27512 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cd40P27512 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cd40P27512 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cd40P27512 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cd40P27512 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cd40P27512 Gm32996-201ENSMUST00000199828 1447 ntBASIC14.83□□□□□ -0.03
Cd40P27512 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cd40P27512 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cd40P27512 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cd40P27512 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cd40P27512 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cd40P27512 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cd40P27512 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cd40P27512 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cd40P27512 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cd40P27512 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cd40P27512 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cd40P27512 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cd40P27512 Gm45328-201ENSMUST00000210942 917 ntBASIC14.83□□□□□ -0.04
Cd40P27512 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cd40P27512 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cd40P27512 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cd40P27512 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Cd40P27512 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Cd40P27512 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Cd40P27512 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cd40P27512 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cd40P27512 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cd40P27512 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cd40P27512 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cd40P27512 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Cd40P27512 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cd40P27512 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cd40P27512 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cd40P27512 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cd40P27512 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cd40P27512 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cd40P27512 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Cd40P27512 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cd40P27512 AC125350.1-201ENSMUST00000225115 903 ntBASIC14.82□□□□□ -0.04
Cd40P27512 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cd40P27512 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cd40P27512 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Cd40P27512 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms