Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pde6bP23440 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC17.86■□□□□ 0.45
Pde6bP23440 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC17.86■□□□□ 0.45
Pde6bP23440 Gm11452-201ENSMUST00000122376 690 ntBASIC17.86■□□□□ 0.45
Pde6bP23440 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pde6bP23440 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.86■□□□□ 0.45
Pde6bP23440 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pde6bP23440 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pde6bP23440 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pde6bP23440 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pde6bP23440 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Pde6bP23440 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pde6bP23440 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pde6bP23440 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pde6bP23440 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pde6bP23440 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pde6bP23440 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Pde6bP23440 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pde6bP23440 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pde6bP23440 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pde6bP23440 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pde6bP23440 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Pde6bP23440 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pde6bP23440 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.85■□□□□ 0.45
Pde6bP23440 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC17.85■□□□□ 0.45
Pde6bP23440 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Pde6bP23440 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Pde6bP23440 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.85■□□□□ 0.45
Pde6bP23440 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Pde6bP23440 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pde6bP23440 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC17.85■□□□□ 0.45
Pde6bP23440 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Pde6bP23440 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pde6bP23440 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pde6bP23440 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pde6bP23440 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pde6bP23440 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Pde6bP23440 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pde6bP23440 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Pde6bP23440 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Pde6bP23440 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pde6bP23440 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
Pde6bP23440 Gm13312-201ENSMUST00000119631 718 ntBASIC17.84■□□□□ 0.45
Pde6bP23440 Gm12644-201ENSMUST00000119935 606 ntBASIC17.84■□□□□ 0.45
Pde6bP23440 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC17.84■□□□□ 0.45
Pde6bP23440 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC17.84■□□□□ 0.45
Pde6bP23440 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pde6bP23440 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pde6bP23440 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pde6bP23440 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pde6bP23440 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Pde6bP23440 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pde6bP23440 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Pde6bP23440 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pde6bP23440 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pde6bP23440 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pde6bP23440 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pde6bP23440 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Pde6bP23440 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pde6bP23440 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pde6bP23440 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.83■□□□□ 0.45
Pde6bP23440 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC17.83■□□□□ 0.44
Pde6bP23440 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Pde6bP23440 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC17.83■□□□□ 0.44
Pde6bP23440 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC17.83■□□□□ 0.44
Pde6bP23440 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pde6bP23440 Gm18195-201ENSMUST00000207604 706 ntBASIC17.83■□□□□ 0.44
Pde6bP23440 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC17.83■□□□□ 0.44
Pde6bP23440 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Pde6bP23440 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pde6bP23440 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Pde6bP23440 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.83■□□□□ 0.44
Pde6bP23440 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Pde6bP23440 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pde6bP23440 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pde6bP23440 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pde6bP23440 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Pde6bP23440 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Pde6bP23440 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pde6bP23440 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pde6bP23440 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Pde6bP23440 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pde6bP23440 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pde6bP23440 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pde6bP23440 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pde6bP23440 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pde6bP23440 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pde6bP23440 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pde6bP23440 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
Pde6bP23440 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC17.82■□□□□ 0.44
Pde6bP23440 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC17.82■□□□□ 0.44
Pde6bP23440 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC17.82■□□□□ 0.44
Pde6bP23440 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pde6bP23440 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pde6bP23440 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pde6bP23440 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pde6bP23440 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pde6bP23440 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC17.82■□□□□ 0.44
Pde6bP23440 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Pde6bP23440 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms