Protein–RNA interactions for Protein: P15975

Usp53, Inactive ubiquitin carboxyl-terminal hydrolase 53, mousemouse

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp53P15975 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Usp53P15975 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Usp53P15975 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Usp53P15975 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Usp53P15975 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Usp53P15975 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Usp53P15975 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Usp53P15975 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Usp53P15975 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Usp53P15975 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Usp53P15975 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Usp53P15975 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Usp53P15975 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Usp53P15975 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Usp53P15975 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Usp53P15975 Gm27459-201ENSMUST00000184860 107 ntBASIC18.95■□□□□ 0.62
Usp53P15975 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC18.95■□□□□ 0.62
Usp53P15975 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Usp53P15975 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Usp53P15975 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Usp53P15975 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Usp53P15975 Gm8839-201ENSMUST00000121279 1645 ntBASIC18.95■□□□□ 0.62
Usp53P15975 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Usp53P15975 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Usp53P15975 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Usp53P15975 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Usp53P15975 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Usp53P15975 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC18.95■□□□□ 0.62
Usp53P15975 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Usp53P15975 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Usp53P15975 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
Usp53P15975 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Usp53P15975 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Usp53P15975 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Usp53P15975 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Usp53P15975 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Usp53P15975 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18.94■□□□□ 0.62
Usp53P15975 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Usp53P15975 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC18.94■□□□□ 0.62
Usp53P15975 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Usp53P15975 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC18.94■□□□□ 0.62
Usp53P15975 Rprl3-201ENSMUST00000157400 290 ntBASIC18.94■□□□□ 0.62
Usp53P15975 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Usp53P15975 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
Usp53P15975 Gm36967-201ENSMUST00000193814 266 ntBASIC18.94■□□□□ 0.62
Usp53P15975 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Usp53P15975 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Usp53P15975 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Usp53P15975 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Usp53P15975 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Usp53P15975 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Usp53P15975 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Usp53P15975 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Usp53P15975 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Usp53P15975 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Usp53P15975 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Usp53P15975 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Usp53P15975 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Usp53P15975 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Usp53P15975 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC18.93■□□□□ 0.62
Usp53P15975 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Usp53P15975 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.93■□□□□ 0.62
Usp53P15975 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Usp53P15975 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Usp53P15975 Gm15372-201ENSMUST00000120729 834 ntBASIC18.93■□□□□ 0.62
Usp53P15975 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Usp53P15975 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Usp53P15975 Gm43347-201ENSMUST00000200226 580 ntBASIC18.93■□□□□ 0.62
Usp53P15975 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC18.93■□□□□ 0.62
Usp53P15975 AC108846.1-201ENSMUST00000214531 513 ntBASIC18.93■□□□□ 0.62
Usp53P15975 Cmtm5-203ENSMUST00000227441 610 ntBASIC18.93■□□□□ 0.62
Usp53P15975 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Usp53P15975 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC18.93■□□□□ 0.62
Usp53P15975 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Usp53P15975 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Usp53P15975 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
Usp53P15975 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Usp53P15975 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Usp53P15975 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Usp53P15975 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Usp53P15975 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Usp53P15975 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Usp53P15975 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Usp53P15975 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Usp53P15975 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC18.92■□□□□ 0.62
Usp53P15975 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.92■□□□□ 0.62
Usp53P15975 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Usp53P15975 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Usp53P15975 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Usp53P15975 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC18.92■□□□□ 0.62
Usp53P15975 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Usp53P15975 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC18.92■□□□□ 0.62
Usp53P15975 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC18.92■□□□□ 0.62
Usp53P15975 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Usp53P15975 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC18.92■□□□□ 0.62
Usp53P15975 AC133598.3-202ENSMUST00000224219 531 ntBASIC18.92■□□□□ 0.62
Usp53P15975 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Usp53P15975 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Usp53P15975 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Usp53P15975 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms