Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Hoxc9P09633 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
Hoxc9P09633 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Hoxc9P09633 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Hoxc9P09633 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Hoxc9P09633 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Hoxc9P09633 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Hoxc9P09633 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Hoxc9P09633 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC21.23■□□□□ 0.99
Hoxc9P09633 Gm15743-202ENSMUST00000182690 1901 ntBASIC21.23■□□□□ 0.99
Hoxc9P09633 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Hoxc9P09633 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Hoxc9P09633 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Hoxc9P09633 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hoxc9P09633 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hoxc9P09633 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hoxc9P09633 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hoxc9P09633 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Hoxc9P09633 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hoxc9P09633 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Hoxc9P09633 Gm7222-201ENSMUST00000117512 906 ntBASIC21.22■□□□□ 0.99
Hoxc9P09633 Gm14494-201ENSMUST00000118786 435 ntBASIC21.22■□□□□ 0.99
Hoxc9P09633 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hoxc9P09633 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hoxc9P09633 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hoxc9P09633 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hoxc9P09633 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hoxc9P09633 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hoxc9P09633 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hoxc9P09633 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hoxc9P09633 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hoxc9P09633 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hoxc9P09633 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hoxc9P09633 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hoxc9P09633 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Hoxc9P09633 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Hoxc9P09633 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC21.21■□□□□ 0.99
Hoxc9P09633 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC21.21■□□□□ 0.99
Hoxc9P09633 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Hoxc9P09633 AC084391.1-201ENSMUST00000200651 141 ntBASIC21.21■□□□□ 0.99
Hoxc9P09633 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC21.21■□□□□ 0.99
Hoxc9P09633 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC21.21■□□□□ 0.99
Hoxc9P09633 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hoxc9P09633 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Hoxc9P09633 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC21.21■□□□□ 0.99
Hoxc9P09633 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hoxc9P09633 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hoxc9P09633 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.99
Hoxc9P09633 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hoxc9P09633 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hoxc9P09633 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hoxc9P09633 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hoxc9P09633 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hoxc9P09633 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC21.2■□□□□ 0.98
Hoxc9P09633 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC21.2■□□□□ 0.98
Hoxc9P09633 Gm9727-201ENSMUST00000161387 555 ntBASIC21.2■□□□□ 0.98
Hoxc9P09633 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC21.2■□□□□ 0.98
Hoxc9P09633 Gm2213-201ENSMUST00000197485 688 ntBASIC21.2■□□□□ 0.98
Hoxc9P09633 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC21.2■□□□□ 0.98
Hoxc9P09633 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hoxc9P09633 AC131586.3-201ENSMUST00000228355 1367 ntBASIC21.2■□□□□ 0.98
Hoxc9P09633 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hoxc9P09633 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hoxc9P09633 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hoxc9P09633 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hoxc9P09633 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC21.2■□□□□ 0.98
Hoxc9P09633 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Hoxc9P09633 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hoxc9P09633 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC21.19■□□□□ 0.98
Hoxc9P09633 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hoxc9P09633 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC21.19■□□□□ 0.98
Hoxc9P09633 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
Hoxc9P09633 AC122901.1-201ENSMUST00000214203 1790 ntBASIC21.19■□□□□ 0.98
Hoxc9P09633 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC21.19■□□□□ 0.98
Hoxc9P09633 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC21.19■□□□□ 0.98
Hoxc9P09633 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Hoxc9P09633 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC21.19■□□□□ 0.98
Hoxc9P09633 Gm27702-201ENSMUST00000184512 56 ntBASIC21.19■□□□□ 0.98
Hoxc9P09633 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Hoxc9P09633 CT943659.1-201ENSMUST00000215459 326 ntBASIC21.19■□□□□ 0.98
Hoxc9P09633 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC21.19■□□□□ 0.98
Hoxc9P09633 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Hoxc9P09633 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Hoxc9P09633 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hoxc9P09633 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC21.19■□□□□ 0.98
Hoxc9P09633 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Hoxc9P09633 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hoxc9P09633 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hoxc9P09633 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hoxc9P09633 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hoxc9P09633 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Hoxc9P09633 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hoxc9P09633 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hoxc9P09633 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
Hoxc9P09633 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Hoxc9P09633 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Hoxc9P09633 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Hoxc9P09633 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hoxc9P09633 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Hoxc9P09633 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms