Protein–RNA interactions for Protein: P06328

Ig heavy chain V region VH558 B4, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06328 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
P06328 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
P06328 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P06328 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
P06328 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
P06328 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
P06328 Gm12669-201ENSMUST00000122162 1009 ntBASIC12.03□□□□□ -0.48
P06328 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
P06328 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC12.03□□□□□ -0.48
P06328 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
P06328 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC12.03□□□□□ -0.48
P06328 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P06328 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P06328 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P06328 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
P06328 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
P06328 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P06328 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
P06328 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P06328 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P06328 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P06328 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P06328 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
P06328 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P06328 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC12.03□□□□□ -0.48
P06328 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC12.03□□□□□ -0.48
P06328 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P06328 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC12.03□□□□□ -0.48
P06328 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
P06328 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC12.02□□□□□ -0.48
P06328 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
P06328 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
P06328 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
P06328 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
P06328 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
P06328 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
P06328 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
P06328 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC12.02□□□□□ -0.49
P06328 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC12.02□□□□□ -0.49
P06328 Gm715-201ENSMUST00000117865 831 ntBASIC12.02□□□□□ -0.49
P06328 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC12.02□□□□□ -0.49
P06328 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC12.02□□□□□ -0.49
P06328 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC12.02□□□□□ -0.49
P06328 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
P06328 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
P06328 Gm3375-201ENSMUST00000203929 796 ntBASIC12.02□□□□□ -0.49
P06328 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC12.02□□□□□ -0.49
P06328 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
P06328 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
P06328 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
P06328 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
P06328 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
P06328 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
P06328 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
P06328 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
P06328 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P06328 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P06328 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P06328 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
P06328 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
P06328 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P06328 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
P06328 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
P06328 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P06328 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
P06328 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P06328 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
P06328 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
P06328 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P06328 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P06328 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
P06328 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC12.01□□□□□ -0.49
P06328 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
P06328 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC12.01□□□□□ -0.49
P06328 Arhgef4-208ENSMUST00000211073 171 ntBASIC12.01□□□□□ -0.49
P06328 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P06328 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P06328 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC12.01□□□□□ -0.49
P06328 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P06328 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC12.01□□□□□ -0.49
P06328 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
P06328 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
P06328 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P06328 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
P06328 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC12.01□□□□□ -0.49
P06328 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
P06328 Actl10-202ENSMUST00000226583 1501 ntBASIC12.01□□□□□ -0.49
P06328 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P06328 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
P06328 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
P06328 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC12□□□□□ -0.49
P06328 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
P06328 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC12□□□□□ -0.49
P06328 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
P06328 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
P06328 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
P06328 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
P06328 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
P06328 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
P06328 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms