Protein–RNA interactions for Protein: P01788

Ig heavy chain V region H8, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01788 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC13.01□□□□□ -0.33
P01788 Gm44878-201ENSMUST00000205812 1295 ntBASIC13.01□□□□□ -0.33
P01788 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P01788 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P01788 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC13.01□□□□□ -0.33
P01788 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
P01788 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P01788 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P01788 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
P01788 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC13□□□□□ -0.33
P01788 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
P01788 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P01788 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P01788 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P01788 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC13□□□□□ -0.33
P01788 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P01788 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P01788 Gm7712-202ENSMUST00000222331 1510 ntBASIC13□□□□□ -0.33
P01788 Gm15378-201ENSMUST00000121894 207 ntBASIC13□□□□□ -0.33
P01788 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
P01788 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P01788 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
P01788 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P01788 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
P01788 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC13□□□□□ -0.33
P01788 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P01788 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC13□□□□□ -0.33
P01788 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC13□□□□□ -0.33
P01788 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P01788 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P01788 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC13□□□□□ -0.33
P01788 AC115863.1-201ENSMUST00000214815 1813 ntBASIC12.99□□□□□ -0.33
P01788 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
P01788 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
P01788 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC12.99□□□□□ -0.33
P01788 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
P01788 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
P01788 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC12.99□□□□□ -0.33
P01788 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
P01788 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
P01788 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P01788 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
P01788 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
P01788 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
P01788 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC12.99□□□□□ -0.33
P01788 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
P01788 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
P01788 AC120002.2-201ENSMUST00000220205 773 ntBASIC12.99□□□□□ -0.33
P01788 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P01788 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
P01788 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P01788 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P01788 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P01788 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P01788 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
P01788 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
P01788 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P01788 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
P01788 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
P01788 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
P01788 Gm43072-201ENSMUST00000200283 1671 ntBASIC12.99□□□□□ -0.33
P01788 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
P01788 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P01788 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P01788 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
P01788 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P01788 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
P01788 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
P01788 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P01788 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P01788 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P01788 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
P01788 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC12.98□□□□□ -0.33
P01788 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
P01788 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
P01788 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
P01788 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P01788 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P01788 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
P01788 Gm45212-201ENSMUST00000205831 3403 ntBASIC12.98□□□□□ -0.33
P01788 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
P01788 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P01788 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P01788 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
P01788 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC12.98□□□□□ -0.33
P01788 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC12.98□□□□□ -0.33
P01788 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P01788 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
P01788 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
P01788 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P01788 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
P01788 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
P01788 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
P01788 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
P01788 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P01788 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
P01788 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
P01788 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
P01788 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
P01788 Prob1-201ENSMUST00000097619 3021 ntBASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms