Protein–RNA interactions for Protein: P01643

Ig kappa chain V-V region MOPC 173, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01643 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
P01643 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
P01643 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
P01643 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC13.01□□□□□ -0.33
P01643 Gm15165-201ENSMUST00000118140 502 ntBASIC13.01□□□□□ -0.33
P01643 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC13.01□□□□□ -0.33
P01643 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
P01643 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC13.01□□□□□ -0.33
P01643 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC13.01□□□□□ -0.33
P01643 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
P01643 Gm27867-201ENSMUST00000184778 125 ntBASIC13.01□□□□□ -0.33
P01643 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC13.01□□□□□ -0.33
P01643 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P01643 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC13.01□□□□□ -0.33
P01643 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P01643 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P01643 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P01643 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
P01643 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P01643 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
P01643 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P01643 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P01643 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC13.01□□□□□ -0.33
P01643 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P01643 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
P01643 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
P01643 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P01643 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P01643 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC13.01□□□□□ -0.33
P01643 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P01643 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
P01643 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
P01643 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC13□□□□□ -0.33
P01643 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC13□□□□□ -0.33
P01643 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P01643 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
P01643 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
P01643 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
P01643 Gm13884-201ENSMUST00000118103 829 ntBASIC13□□□□□ -0.33
P01643 Gm11452-201ENSMUST00000122376 690 ntBASIC13□□□□□ -0.33
P01643 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P01643 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC13□□□□□ -0.33
P01643 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC13□□□□□ -0.33
P01643 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
P01643 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P01643 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
P01643 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P01643 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P01643 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P01643 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
P01643 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC13□□□□□ -0.33
P01643 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P01643 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
P01643 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P01643 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
P01643 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P01643 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P01643 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P01643 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC12.99□□□□□ -0.33
P01643 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
P01643 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
P01643 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
P01643 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
P01643 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P01643 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
P01643 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P01643 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P01643 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P01643 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
P01643 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC12.99□□□□□ -0.33
P01643 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
P01643 Gm44771-201ENSMUST00000206975 626 ntBASIC12.99□□□□□ -0.33
P01643 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC12.99□□□□□ -0.33
P01643 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC12.99□□□□□ -0.33
P01643 CT009713.7-201ENSMUST00000224689 571 ntBASIC12.99□□□□□ -0.33
P01643 AC114585.2-202ENSMUST00000228094 426 ntBASIC12.99□□□□□ -0.33
P01643 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P01643 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P01643 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P01643 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
P01643 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P01643 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P01643 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
P01643 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
P01643 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P01643 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P01643 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
P01643 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
P01643 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
P01643 Gm9889-202ENSMUST00000206983 1577 ntBASIC12.98□□□□□ -0.33
P01643 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P01643 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P01643 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
P01643 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
P01643 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
P01643 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
P01643 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
P01643 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P01643 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P01643 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms