Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vti1aO89116 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vti1aO89116 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vti1aO89116 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Vti1aO89116 Haglr-201ENSMUST00000100000 2085 ntBASIC17.67■□□□□ 0.42
Vti1aO89116 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Vti1aO89116 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vti1aO89116 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC17.67■□□□□ 0.42
Vti1aO89116 Gm13216-201ENSMUST00000117145 591 ntBASIC17.67■□□□□ 0.42
Vti1aO89116 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.67■□□□□ 0.42
Vti1aO89116 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Vti1aO89116 Mir8098-201ENSMUST00000184011 137 ntBASIC17.67■□□□□ 0.42
Vti1aO89116 Gm27459-201ENSMUST00000184860 107 ntBASIC17.67■□□□□ 0.42
Vti1aO89116 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.67■□□□□ 0.42
Vti1aO89116 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vti1aO89116 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vti1aO89116 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vti1aO89116 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Vti1aO89116 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vti1aO89116 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Vti1aO89116 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.67■□□□□ 0.42
Vti1aO89116 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vti1aO89116 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vti1aO89116 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vti1aO89116 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
Vti1aO89116 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vti1aO89116 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vti1aO89116 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC17.66■□□□□ 0.42
Vti1aO89116 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Vti1aO89116 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC17.66■□□□□ 0.42
Vti1aO89116 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vti1aO89116 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vti1aO89116 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Vti1aO89116 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Vti1aO89116 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Vti1aO89116 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Vti1aO89116 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.66■□□□□ 0.42
Vti1aO89116 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vti1aO89116 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vti1aO89116 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vti1aO89116 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vti1aO89116 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Vti1aO89116 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vti1aO89116 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vti1aO89116 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Vti1aO89116 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vti1aO89116 Gm11452-201ENSMUST00000122376 690 ntBASIC17.65■□□□□ 0.42
Vti1aO89116 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.65■□□□□ 0.42
Vti1aO89116 Gm6443-201ENSMUST00000203599 874 ntBASIC17.65■□□□□ 0.42
Vti1aO89116 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Vti1aO89116 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vti1aO89116 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vti1aO89116 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vti1aO89116 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vti1aO89116 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Vti1aO89116 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vti1aO89116 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vti1aO89116 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Vti1aO89116 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Vti1aO89116 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Vti1aO89116 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.64■□□□□ 0.41
Vti1aO89116 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vti1aO89116 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vti1aO89116 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vti1aO89116 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vti1aO89116 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC17.64■□□□□ 0.41
Vti1aO89116 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vti1aO89116 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vti1aO89116 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Vti1aO89116 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vti1aO89116 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vti1aO89116 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vti1aO89116 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vti1aO89116 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vti1aO89116 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vti1aO89116 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vti1aO89116 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.63■□□□□ 0.41
Vti1aO89116 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.63■□□□□ 0.41
Vti1aO89116 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.63■□□□□ 0.41
Vti1aO89116 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vti1aO89116 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC17.63■□□□□ 0.41
Vti1aO89116 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC17.63■□□□□ 0.41
Vti1aO89116 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Vti1aO89116 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC17.63■□□□□ 0.41
Vti1aO89116 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.63■□□□□ 0.41
Vti1aO89116 Gm10052-201ENSMUST00000168019 960 ntBASIC17.63■□□□□ 0.41
Vti1aO89116 AC153889.1-201ENSMUST00000219257 330 ntBASIC17.63■□□□□ 0.41
Vti1aO89116 Gm7729-201ENSMUST00000050143 801 ntBASIC17.63■□□□□ 0.41
Vti1aO89116 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Vti1aO89116 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vti1aO89116 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.63■□□□□ 0.41
Vti1aO89116 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vti1aO89116 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vti1aO89116 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.63■□□□□ 0.41
Vti1aO89116 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vti1aO89116 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vti1aO89116 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vti1aO89116 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vti1aO89116 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vti1aO89116 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms