Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CopeO89079 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CopeO89079 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CopeO89079 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CopeO89079 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CopeO89079 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CopeO89079 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CopeO89079 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.97■□□□□ 0.31
CopeO89079 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CopeO89079 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CopeO89079 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.97■□□□□ 0.31
CopeO89079 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.97■□□□□ 0.31
CopeO89079 Gm5643-201ENSMUST00000117081 966 ntBASIC16.97■□□□□ 0.31
CopeO89079 Gm5297-201ENSMUST00000198555 1171 ntBASIC16.97■□□□□ 0.31
CopeO89079 Gm44878-201ENSMUST00000205812 1295 ntBASIC16.97■□□□□ 0.31
CopeO89079 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
CopeO89079 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CopeO89079 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CopeO89079 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CopeO89079 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CopeO89079 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CopeO89079 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CopeO89079 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CopeO89079 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CopeO89079 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CopeO89079 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CopeO89079 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CopeO89079 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CopeO89079 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CopeO89079 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CopeO89079 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CopeO89079 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CopeO89079 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CopeO89079 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CopeO89079 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.96■□□□□ 0.31
CopeO89079 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CopeO89079 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CopeO89079 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CopeO89079 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CopeO89079 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.96■□□□□ 0.31
CopeO89079 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CopeO89079 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CopeO89079 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CopeO89079 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CopeO89079 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
CopeO89079 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.3
CopeO89079 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CopeO89079 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CopeO89079 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CopeO89079 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CopeO89079 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CopeO89079 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CopeO89079 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
CopeO89079 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CopeO89079 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CopeO89079 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CopeO89079 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CopeO89079 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CopeO89079 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
CopeO89079 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CopeO89079 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CopeO89079 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CopeO89079 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CopeO89079 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CopeO89079 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CopeO89079 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CopeO89079 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC16.94■□□□□ 0.3
CopeO89079 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CopeO89079 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
CopeO89079 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.94■□□□□ 0.3
CopeO89079 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.94■□□□□ 0.3
CopeO89079 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC16.94■□□□□ 0.3
CopeO89079 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CopeO89079 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CopeO89079 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CopeO89079 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CopeO89079 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.94■□□□□ 0.3
CopeO89079 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CopeO89079 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CopeO89079 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.93■□□□□ 0.3
CopeO89079 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CopeO89079 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.93■□□□□ 0.3
CopeO89079 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CopeO89079 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CopeO89079 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CopeO89079 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CopeO89079 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CopeO89079 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
CopeO89079 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.93■□□□□ 0.3
CopeO89079 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CopeO89079 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
CopeO89079 Gm10698-201ENSMUST00000182663 604 ntBASIC16.93■□□□□ 0.3
CopeO89079 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
CopeO89079 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CopeO89079 AC135637.1-201ENSMUST00000227750 365 ntBASIC16.93■□□□□ 0.3
CopeO89079 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
CopeO89079 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CopeO89079 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CopeO89079 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CopeO89079 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms