Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn1O88551 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC14.05□□□□□ -0.16
Cldn1O88551 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.05□□□□□ -0.16
Cldn1O88551 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn1O88551 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn1O88551 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
Cldn1O88551 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn1O88551 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn1O88551 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn1O88551 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn1O88551 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn1O88551 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn1O88551 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn1O88551 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Cldn1O88551 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn1O88551 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn1O88551 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn1O88551 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn1O88551 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn1O88551 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn1O88551 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn1O88551 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn1O88551 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC14.04□□□□□ -0.16
Cldn1O88551 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Cldn1O88551 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC14.04□□□□□ -0.16
Cldn1O88551 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC14.04□□□□□ -0.16
Cldn1O88551 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC14.04□□□□□ -0.16
Cldn1O88551 Gm44357-201ENSMUST00000195897 142 ntBASIC14.04□□□□□ -0.16
Cldn1O88551 Gm19658-201ENSMUST00000196231 138 ntBASIC14.04□□□□□ -0.16
Cldn1O88551 Gm44367-201ENSMUST00000196836 138 ntBASIC14.04□□□□□ -0.16
Cldn1O88551 Gm44350-201ENSMUST00000197197 138 ntBASIC14.04□□□□□ -0.16
Cldn1O88551 Gm44390-201ENSMUST00000197533 144 ntBASIC14.04□□□□□ -0.16
Cldn1O88551 Gm44313-201ENSMUST00000198018 138 ntBASIC14.04□□□□□ -0.16
Cldn1O88551 Gm44486-201ENSMUST00000198508 138 ntBASIC14.04□□□□□ -0.16
Cldn1O88551 Gm44454-201ENSMUST00000198541 138 ntBASIC14.04□□□□□ -0.16
Cldn1O88551 Gm44314-201ENSMUST00000199263 138 ntBASIC14.04□□□□□ -0.16
Cldn1O88551 Gm44394-201ENSMUST00000199558 138 ntBASIC14.04□□□□□ -0.16
Cldn1O88551 Gm44484-201ENSMUST00000199873 138 ntBASIC14.04□□□□□ -0.16
Cldn1O88551 Gm44466-201ENSMUST00000200264 138 ntBASIC14.04□□□□□ -0.16
Cldn1O88551 Gm44359-201ENSMUST00000200671 138 ntBASIC14.04□□□□□ -0.16
Cldn1O88551 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Cldn1O88551 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Cldn1O88551 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn1O88551 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn1O88551 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn1O88551 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC14.04□□□□□ -0.16
Cldn1O88551 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn1O88551 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn1O88551 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn1O88551 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Cldn1O88551 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn1O88551 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Cldn1O88551 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn1O88551 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn1O88551 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Cldn1O88551 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn1O88551 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn1O88551 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn1O88551 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn1O88551 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn1O88551 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn1O88551 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Cldn1O88551 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.03□□□□□ -0.16
Cldn1O88551 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC14.03□□□□□ -0.16
Cldn1O88551 Gm12350-201ENSMUST00000121208 462 ntBASIC14.03□□□□□ -0.16
Cldn1O88551 AC153794.1-201ENSMUST00000169148 126 ntBASIC14.03□□□□□ -0.16
Cldn1O88551 Gm27702-201ENSMUST00000184512 56 ntBASIC14.03□□□□□ -0.16
Cldn1O88551 Gm27867-201ENSMUST00000184778 125 ntBASIC14.03□□□□□ -0.16
Cldn1O88551 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC14.03□□□□□ -0.16
Cldn1O88551 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn1O88551 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn1O88551 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn1O88551 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn1O88551 Gm19721-201ENSMUST00000195284 1764 ntBASIC14.03□□□□□ -0.16
Cldn1O88551 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn1O88551 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn1O88551 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn1O88551 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Cldn1O88551 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC14.02□□□□□ -0.16
Cldn1O88551 Gm45244-201ENSMUST00000211328 2200 ntBASIC14.02□□□□□ -0.16
Cldn1O88551 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cldn1O88551 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cldn1O88551 Phf7-203ENSMUST00000226565 1971 ntBASIC14.02□□□□□ -0.16
Cldn1O88551 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC14.02□□□□□ -0.16
Cldn1O88551 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cldn1O88551 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cldn1O88551 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cldn1O88551 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cldn1O88551 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cldn1O88551 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Cldn1O88551 Gm5264-201ENSMUST00000190584 848 ntBASIC14.02□□□□□ -0.17
Cldn1O88551 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cldn1O88551 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cldn1O88551 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC14.02□□□□□ -0.17
Cldn1O88551 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cldn1O88551 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cldn1O88551 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cldn1O88551 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cldn1O88551 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC14.02□□□□□ -0.17
Cldn1O88551 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms