Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cops4O88544 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cops4O88544 Gm12441-201ENSMUST00000121806 588 ntBASIC15.2■□□□□ 0.02
Cops4O88544 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Cops4O88544 Gm20049-201ENSMUST00000219950 730 ntBASIC15.2■□□□□ 0.02
Cops4O88544 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cops4O88544 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.2■□□□□ 0.02
Cops4O88544 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cops4O88544 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cops4O88544 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC15.2■□□□□ 0.02
Cops4O88544 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cops4O88544 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cops4O88544 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cops4O88544 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cops4O88544 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cops4O88544 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cops4O88544 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cops4O88544 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cops4O88544 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cops4O88544 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cops4O88544 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC15.19■□□□□ 0.02
Cops4O88544 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Cops4O88544 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cops4O88544 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cops4O88544 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cops4O88544 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cops4O88544 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Cops4O88544 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cops4O88544 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cops4O88544 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cops4O88544 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Cops4O88544 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC15.19■□□□□ 0.02
Cops4O88544 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cops4O88544 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cops4O88544 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cops4O88544 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cops4O88544 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cops4O88544 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cops4O88544 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cops4O88544 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cops4O88544 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cops4O88544 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC15.19■□□□□ 0.02
Cops4O88544 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Cops4O88544 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cops4O88544 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
Cops4O88544 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Cops4O88544 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cops4O88544 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cops4O88544 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cops4O88544 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Cops4O88544 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cops4O88544 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC15.18■□□□□ 0.02
Cops4O88544 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cops4O88544 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cops4O88544 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15.18■□□□□ 0.02
Cops4O88544 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cops4O88544 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Cops4O88544 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cops4O88544 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cops4O88544 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cops4O88544 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cops4O88544 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cops4O88544 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cops4O88544 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cops4O88544 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cops4O88544 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cops4O88544 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cops4O88544 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Cops4O88544 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cops4O88544 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Cops4O88544 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Cops4O88544 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
Cops4O88544 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Cops4O88544 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cops4O88544 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Cops4O88544 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Cops4O88544 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cops4O88544 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cops4O88544 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cops4O88544 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cops4O88544 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Cops4O88544 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC15.17■□□□□ 0.02
Cops4O88544 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC15.17■□□□□ 0.02
Cops4O88544 Gm18666-201ENSMUST00000190039 958 ntBASIC15.17■□□□□ 0.02
Cops4O88544 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC15.17■□□□□ 0.02
Cops4O88544 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC15.17■□□□□ 0.02
Cops4O88544 Gm18025-201ENSMUST00000221733 862 ntBASIC15.17■□□□□ 0.02
Cops4O88544 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cops4O88544 Prob1-201ENSMUST00000097619 3021 ntBASIC15.17■□□□□ 0.02
Cops4O88544 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC15.17■□□□□ 0.02
Cops4O88544 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cops4O88544 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cops4O88544 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cops4O88544 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cops4O88544 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC15.17■□□□□ 0.02
Cops4O88544 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cops4O88544 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cops4O88544 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cops4O88544 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.16■□□□□ 0.02
Cops4O88544 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms