Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.99
Ubr1O70481 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Ubr1O70481 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ubr1O70481 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ubr1O70481 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ubr1O70481 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ubr1O70481 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ubr1O70481 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ubr1O70481 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ubr1O70481 Gm13597-201ENSMUST00000121239 375 ntBASIC21.2■□□□□ 0.98
Ubr1O70481 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC21.2■□□□□ 0.98
Ubr1O70481 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC21.2■□□□□ 0.98
Ubr1O70481 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ubr1O70481 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Ubr1O70481 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ubr1O70481 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC21.19■□□□□ 0.98
Ubr1O70481 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ubr1O70481 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Ubr1O70481 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ubr1O70481 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Ubr1O70481 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ubr1O70481 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC21.19■□□□□ 0.98
Ubr1O70481 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC21.19■□□□□ 0.98
Ubr1O70481 AC225888.1-201ENSMUST00000227184 728 ntBASIC21.19■□□□□ 0.98
Ubr1O70481 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ubr1O70481 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ubr1O70481 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
Ubr1O70481 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ubr1O70481 Gm11873-201ENSMUST00000117877 1304 ntBASIC21.19■□□□□ 0.98
Ubr1O70481 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ubr1O70481 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ubr1O70481 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ubr1O70481 Gm7229-201ENSMUST00000214719 1007 ntBASIC21.18■□□□□ 0.98
Ubr1O70481 Gm18622-201ENSMUST00000219361 595 ntBASIC21.18■□□□□ 0.98
Ubr1O70481 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Ubr1O70481 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ubr1O70481 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ubr1O70481 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ubr1O70481 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ubr1O70481 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ubr1O70481 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ubr1O70481 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ubr1O70481 Gm8344-201ENSMUST00000119813 856 ntBASIC21.18■□□□□ 0.98
Ubr1O70481 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ubr1O70481 Gm44945-201ENSMUST00000206764 1187 ntBASIC21.18■□□□□ 0.98
Ubr1O70481 CT943659.1-201ENSMUST00000215459 326 ntBASIC21.18■□□□□ 0.98
Ubr1O70481 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC21.17■□□□□ 0.98
Ubr1O70481 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ubr1O70481 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ubr1O70481 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ubr1O70481 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ubr1O70481 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC21.17■□□□□ 0.98
Ubr1O70481 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC21.17■□□□□ 0.98
Ubr1O70481 AC147366.1-201ENSMUST00000227671 852 ntBASIC21.17■□□□□ 0.98
Ubr1O70481 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ubr1O70481 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ubr1O70481 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Ubr1O70481 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ubr1O70481 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ubr1O70481 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ubr1O70481 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ubr1O70481 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC21.16■□□□□ 0.98
Ubr1O70481 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ubr1O70481 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC21.16■□□□□ 0.98
Ubr1O70481 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ubr1O70481 Gm2213-201ENSMUST00000197485 688 ntBASIC21.16■□□□□ 0.98
Ubr1O70481 AC090659.1-201ENSMUST00000224334 768 ntBASIC21.16■□□□□ 0.98
Ubr1O70481 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ubr1O70481 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC21.16■□□□□ 0.98
Ubr1O70481 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ubr1O70481 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC21.16■□□□□ 0.98
Ubr1O70481 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ubr1O70481 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC21.16■□□□□ 0.98
Ubr1O70481 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC21.16■□□□□ 0.98
Ubr1O70481 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC21.15■□□□□ 0.98
Ubr1O70481 Gm4609-201ENSMUST00000106443 1002 ntBASIC21.15■□□□□ 0.98
Ubr1O70481 Gm5138-201ENSMUST00000113842 1002 ntBASIC21.15■□□□□ 0.98
Ubr1O70481 Gm15191-201ENSMUST00000117933 1000 ntBASIC21.15■□□□□ 0.98
Ubr1O70481 Gm12182-201ENSMUST00000118655 1008 ntBASIC21.15■□□□□ 0.98
Ubr1O70481 Gm13882-201ENSMUST00000120886 1002 ntBASIC21.15■□□□□ 0.98
Ubr1O70481 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC21.15■□□□□ 0.98
Ubr1O70481 Gm10284-201ENSMUST00000145057 1005 ntBASIC21.15■□□□□ 0.98
Ubr1O70481 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ubr1O70481 Gm10481-201ENSMUST00000179228 1002 ntBASIC21.15■□□□□ 0.98
Ubr1O70481 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC21.15■□□□□ 0.98
Ubr1O70481 Gm2574-201ENSMUST00000181051 1002 ntBASIC21.15■□□□□ 0.98
Ubr1O70481 Gm3200-201ENSMUST00000181493 1002 ntBASIC21.15■□□□□ 0.98
Ubr1O70481 Gm8825-201ENSMUST00000182565 998 ntBASIC21.15■□□□□ 0.98
Ubr1O70481 Gm4518-201ENSMUST00000182638 718 ntBASIC21.15■□□□□ 0.98
Ubr1O70481 Gm8330-201ENSMUST00000182754 1008 ntBASIC21.15■□□□□ 0.98
Ubr1O70481 Gm4575-201ENSMUST00000182991 1002 ntBASIC21.15■□□□□ 0.98
Ubr1O70481 Gm8709-201ENSMUST00000183230 1012 ntBASIC21.15■□□□□ 0.98
Ubr1O70481 AC093926.2-201ENSMUST00000214468 1228 ntBASIC21.15■□□□□ 0.98
Ubr1O70481 Gm10293-201ENSMUST00000076317 1002 ntBASIC21.15■□□□□ 0.98
Ubr1O70481 Gm6316-201ENSMUST00000082064 1020 ntBASIC21.15■□□□□ 0.98
Ubr1O70481 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ubr1O70481 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ubr1O70481 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC21.15■□□□□ 0.98
Ubr1O70481 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ubr1O70481 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms