Protein–RNA interactions for Protein: O70480

Vamp4, Vesicle-associated membrane protein 4, mousemouse

Predictions only

Length 141 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp4O70480 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vamp4O70480 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vamp4O70480 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vamp4O70480 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vamp4O70480 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
Vamp4O70480 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vamp4O70480 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vamp4O70480 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vamp4O70480 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vamp4O70480 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vamp4O70480 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vamp4O70480 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC20.67■□□□□ 0.9
Vamp4O70480 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vamp4O70480 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vamp4O70480 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vamp4O70480 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vamp4O70480 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC20.67■□□□□ 0.9
Vamp4O70480 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Vamp4O70480 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vamp4O70480 AC115863.1-201ENSMUST00000214815 1813 ntBASIC20.67■□□□□ 0.9
Vamp4O70480 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vamp4O70480 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vamp4O70480 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
Vamp4O70480 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
Vamp4O70480 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC20.66■□□□□ 0.9
Vamp4O70480 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC20.66■□□□□ 0.9
Vamp4O70480 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Vamp4O70480 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC20.66■□□□□ 0.9
Vamp4O70480 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Vamp4O70480 Gm6858-201ENSMUST00000208582 1468 ntBASIC20.66■□□□□ 0.9
Vamp4O70480 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vamp4O70480 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vamp4O70480 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Vamp4O70480 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vamp4O70480 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vamp4O70480 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Vamp4O70480 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC20.66■□□□□ 0.9
Vamp4O70480 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vamp4O70480 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vamp4O70480 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Vamp4O70480 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Vamp4O70480 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vamp4O70480 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC20.65■□□□□ 0.9
Vamp4O70480 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vamp4O70480 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vamp4O70480 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vamp4O70480 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC20.65■□□□□ 0.9
Vamp4O70480 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Vamp4O70480 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vamp4O70480 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Vamp4O70480 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vamp4O70480 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Vamp4O70480 AC114585.2-202ENSMUST00000228094 426 ntBASIC20.65■□□□□ 0.9
Vamp4O70480 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vamp4O70480 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC20.65■□□□□ 0.9
Vamp4O70480 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Vamp4O70480 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vamp4O70480 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vamp4O70480 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC20.65■□□□□ 0.9
Vamp4O70480 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Vamp4O70480 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
Vamp4O70480 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Vamp4O70480 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Vamp4O70480 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC20.64■□□□□ 0.9
Vamp4O70480 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Vamp4O70480 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Vamp4O70480 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Vamp4O70480 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Vamp4O70480 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC20.64■□□□□ 0.89
Vamp4O70480 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Vamp4O70480 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC20.64■□□□□ 0.89
Vamp4O70480 AC153889.1-201ENSMUST00000219257 330 ntBASIC20.64■□□□□ 0.89
Vamp4O70480 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Vamp4O70480 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Vamp4O70480 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Vamp4O70480 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Vamp4O70480 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Vamp4O70480 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Vamp4O70480 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Vamp4O70480 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Vamp4O70480 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vamp4O70480 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vamp4O70480 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vamp4O70480 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vamp4O70480 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vamp4O70480 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vamp4O70480 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vamp4O70480 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vamp4O70480 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vamp4O70480 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
Vamp4O70480 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vamp4O70480 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
Vamp4O70480 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vamp4O70480 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vamp4O70480 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vamp4O70480 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Vamp4O70480 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vamp4O70480 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vamp4O70480 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vamp4O70480 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms