Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 Gm20628-201ENSMUST00000177363 3215 ntBASIC15.56■□□□□ 0.08
Rdh5O55240 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC15.56■□□□□ 0.08
Rdh5O55240 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rdh5O55240 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Rdh5O55240 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rdh5O55240 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rdh5O55240 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rdh5O55240 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Rdh5O55240 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rdh5O55240 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Rdh5O55240 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC15.56■□□□□ 0.08
Rdh5O55240 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC15.56■□□□□ 0.08
Rdh5O55240 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rdh5O55240 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC15.56■□□□□ 0.08
Rdh5O55240 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rdh5O55240 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC15.56■□□□□ 0.08
Rdh5O55240 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rdh5O55240 Gm37166-201ENSMUST00000195473 2474 ntBASIC15.56■□□□□ 0.08
Rdh5O55240 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rdh5O55240 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rdh5O55240 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rdh5O55240 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Rdh5O55240 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
Rdh5O55240 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rdh5O55240 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rdh5O55240 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC15.55■□□□□ 0.08
Rdh5O55240 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Rdh5O55240 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rdh5O55240 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rdh5O55240 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rdh5O55240 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rdh5O55240 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rdh5O55240 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rdh5O55240 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rdh5O55240 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rdh5O55240 Gm27389-201ENSMUST00000183622 195 ntBASIC15.55■□□□□ 0.08
Rdh5O55240 Gm18421-201ENSMUST00000204122 625 ntBASIC15.55■□□□□ 0.08
Rdh5O55240 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rdh5O55240 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rdh5O55240 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rdh5O55240 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rdh5O55240 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rdh5O55240 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC15.55■□□□□ 0.08
Rdh5O55240 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rdh5O55240 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rdh5O55240 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rdh5O55240 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rdh5O55240 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rdh5O55240 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rdh5O55240 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rdh5O55240 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC15.55■□□□□ 0.08
Rdh5O55240 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
Rdh5O55240 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Rdh5O55240 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.54■□□□□ 0.08
Rdh5O55240 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rdh5O55240 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rdh5O55240 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rdh5O55240 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rdh5O55240 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rdh5O55240 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rdh5O55240 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC15.54■□□□□ 0.08
Rdh5O55240 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rdh5O55240 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rdh5O55240 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rdh5O55240 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC15.54■□□□□ 0.08
Rdh5O55240 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rdh5O55240 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
Rdh5O55240 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rdh5O55240 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC15.54■□□□□ 0.08
Rdh5O55240 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rdh5O55240 Gm23634-201ENSMUST00000175071 91 ntBASIC15.54■□□□□ 0.08
Rdh5O55240 Gm22697-201ENSMUST00000175194 63 ntBASIC15.54■□□□□ 0.08
Rdh5O55240 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
Rdh5O55240 Gm18101-201ENSMUST00000215769 548 ntBASIC15.54■□□□□ 0.08
Rdh5O55240 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rdh5O55240 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rdh5O55240 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC15.54■□□□□ 0.08
Rdh5O55240 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rdh5O55240 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rdh5O55240 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.54■□□□□ 0.08
Rdh5O55240 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rdh5O55240 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rdh5O55240 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rdh5O55240 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Rdh5O55240 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rdh5O55240 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rdh5O55240 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rdh5O55240 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rdh5O55240 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rdh5O55240 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rdh5O55240 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rdh5O55240 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Rdh5O55240 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rdh5O55240 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rdh5O55240 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rdh5O55240 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC15.53■□□□□ 0.08
Rdh5O55240 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC15.53■□□□□ 0.08
Rdh5O55240 Gm21559-201ENSMUST00000220638 855 ntBASIC15.53■□□□□ 0.08
Rdh5O55240 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC15.53■□□□□ 0.08
Rdh5O55240 Gm8587-201ENSMUST00000076538 843 ntBASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms