Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Gm7638-201ENSMUST00000121348 967 ntBASIC13.6□□□□□ -0.23
SncaO55042 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
SncaO55042 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SncaO55042 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC13.6□□□□□ -0.23
SncaO55042 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SncaO55042 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SncaO55042 Gm27000-201ENSMUST00000182943 842 ntBASIC13.6□□□□□ -0.23
SncaO55042 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC13.6□□□□□ -0.23
SncaO55042 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SncaO55042 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC13.6□□□□□ -0.23
SncaO55042 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
SncaO55042 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SncaO55042 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC13.6□□□□□ -0.23
SncaO55042 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SncaO55042 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
SncaO55042 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SncaO55042 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SncaO55042 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
SncaO55042 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC13.6□□□□□ -0.23
SncaO55042 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SncaO55042 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SncaO55042 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC13.6□□□□□ -0.23
SncaO55042 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SncaO55042 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
SncaO55042 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SncaO55042 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SncaO55042 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SncaO55042 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SncaO55042 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SncaO55042 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SncaO55042 Gm7712-202ENSMUST00000222331 1510 ntBASIC13.59□□□□□ -0.23
SncaO55042 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SncaO55042 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SncaO55042 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SncaO55042 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC13.59□□□□□ -0.23
SncaO55042 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SncaO55042 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC13.59□□□□□ -0.23
SncaO55042 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SncaO55042 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
SncaO55042 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
SncaO55042 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SncaO55042 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC13.59□□□□□ -0.23
SncaO55042 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SncaO55042 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC13.59□□□□□ -0.23
SncaO55042 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
SncaO55042 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SncaO55042 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SncaO55042 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SncaO55042 Gm10698-201ENSMUST00000182663 604 ntBASIC13.59□□□□□ -0.23
SncaO55042 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC13.59□□□□□ -0.23
SncaO55042 AC120002.2-201ENSMUST00000220205 773 ntBASIC13.59□□□□□ -0.23
SncaO55042 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SncaO55042 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC13.59□□□□□ -0.23
SncaO55042 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
SncaO55042 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SncaO55042 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SncaO55042 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
SncaO55042 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SncaO55042 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SncaO55042 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SncaO55042 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SncaO55042 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SncaO55042 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
SncaO55042 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SncaO55042 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
SncaO55042 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SncaO55042 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
SncaO55042 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
SncaO55042 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
SncaO55042 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
SncaO55042 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
SncaO55042 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
SncaO55042 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
SncaO55042 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
SncaO55042 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SncaO55042 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
SncaO55042 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SncaO55042 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SncaO55042 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
SncaO55042 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SncaO55042 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SncaO55042 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
SncaO55042 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SncaO55042 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC13.58□□□□□ -0.24
SncaO55042 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
SncaO55042 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC13.58□□□□□ -0.24
SncaO55042 Gm38027-201ENSMUST00000192315 235 ntBASIC13.58□□□□□ -0.24
SncaO55042 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC13.58□□□□□ -0.24
SncaO55042 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SncaO55042 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
SncaO55042 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SncaO55042 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SncaO55042 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
SncaO55042 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SncaO55042 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
SncaO55042 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
SncaO55042 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
SncaO55042 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SncaO55042 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SncaO55042 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms