Protein–RNA interactions for Protein: O35973

Per1, Period circadian protein homolog 1, mousemouse

Predictions only

Length 1,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per1O35973 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Per1O35973 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Per1O35973 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Per1O35973 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Per1O35973 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Per1O35973 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Per1O35973 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Per1O35973 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Per1O35973 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Per1O35973 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Per1O35973 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
Per1O35973 Gm24589-201ENSMUST00000116692 94 ntBASIC17.76■□□□□ 0.43
Per1O35973 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Per1O35973 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Per1O35973 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Per1O35973 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC17.76■□□□□ 0.43
Per1O35973 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC17.76■□□□□ 0.43
Per1O35973 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC17.76■□□□□ 0.43
Per1O35973 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC17.76■□□□□ 0.43
Per1O35973 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Per1O35973 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Per1O35973 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
Per1O35973 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Per1O35973 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Per1O35973 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Per1O35973 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Per1O35973 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Per1O35973 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Per1O35973 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Per1O35973 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Per1O35973 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Per1O35973 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Per1O35973 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Per1O35973 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Per1O35973 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Per1O35973 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC17.75■□□□□ 0.43
Per1O35973 Gm27867-201ENSMUST00000184778 125 ntBASIC17.75■□□□□ 0.43
Per1O35973 Gm27741-201ENSMUST00000185060 237 ntBASIC17.75■□□□□ 0.43
Per1O35973 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Per1O35973 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Per1O35973 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Per1O35973 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Per1O35973 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Per1O35973 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC17.75■□□□□ 0.43
Per1O35973 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Per1O35973 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Per1O35973 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Per1O35973 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
Per1O35973 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Per1O35973 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Per1O35973 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Per1O35973 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Per1O35973 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Per1O35973 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Per1O35973 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Per1O35973 Gm7935-201ENSMUST00000100555 1278 ntBASIC17.74■□□□□ 0.43
Per1O35973 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC17.74■□□□□ 0.43
Per1O35973 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Per1O35973 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC17.74■□□□□ 0.43
Per1O35973 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Per1O35973 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Per1O35973 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Per1O35973 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Per1O35973 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Per1O35973 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Per1O35973 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
Per1O35973 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
Per1O35973 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.73■□□□□ 0.43
Per1O35973 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Per1O35973 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.73■□□□□ 0.43
Per1O35973 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Per1O35973 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Per1O35973 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Per1O35973 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Per1O35973 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Per1O35973 Gm12644-201ENSMUST00000119935 606 ntBASIC17.73■□□□□ 0.43
Per1O35973 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Per1O35973 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC17.73■□□□□ 0.43
Per1O35973 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC17.73■□□□□ 0.43
Per1O35973 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
Per1O35973 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Per1O35973 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Per1O35973 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.73■□□□□ 0.43
Per1O35973 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Per1O35973 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Per1O35973 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Per1O35973 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Per1O35973 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Per1O35973 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Per1O35973 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Per1O35973 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Per1O35973 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Per1O35973 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Per1O35973 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Per1O35973 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Per1O35973 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC17.72■□□□□ 0.43
Per1O35973 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC17.72■□□□□ 0.43
Per1O35973 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Per1O35973 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Per1O35973 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms