Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.65■□□□□ 0.42
Nr1i3O35627 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nr1i3O35627 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nr1i3O35627 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nr1i3O35627 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
Nr1i3O35627 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nr1i3O35627 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nr1i3O35627 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nr1i3O35627 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nr1i3O35627 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nr1i3O35627 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nr1i3O35627 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Nr1i3O35627 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Nr1i3O35627 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
Nr1i3O35627 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Nr1i3O35627 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Nr1i3O35627 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Nr1i3O35627 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.64■□□□□ 0.41
Nr1i3O35627 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nr1i3O35627 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nr1i3O35627 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nr1i3O35627 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Nr1i3O35627 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nr1i3O35627 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Nr1i3O35627 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Nr1i3O35627 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Nr1i3O35627 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Nr1i3O35627 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.64■□□□□ 0.41
Nr1i3O35627 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Nr1i3O35627 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.64■□□□□ 0.41
Nr1i3O35627 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.64■□□□□ 0.41
Nr1i3O35627 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Nr1i3O35627 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Nr1i3O35627 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nr1i3O35627 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nr1i3O35627 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nr1i3O35627 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nr1i3O35627 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Nr1i3O35627 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nr1i3O35627 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Nr1i3O35627 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nr1i3O35627 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC17.64■□□□□ 0.41
Nr1i3O35627 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.64■□□□□ 0.41
Nr1i3O35627 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Nr1i3O35627 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nr1i3O35627 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Nr1i3O35627 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Nr1i3O35627 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nr1i3O35627 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Nr1i3O35627 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nr1i3O35627 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nr1i3O35627 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Nr1i3O35627 Mir1668-201ENSMUST00000184114 107 ntBASIC17.63■□□□□ 0.41
Nr1i3O35627 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nr1i3O35627 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nr1i3O35627 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nr1i3O35627 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nr1i3O35627 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nr1i3O35627 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nr1i3O35627 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Nr1i3O35627 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nr1i3O35627 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Nr1i3O35627 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nr1i3O35627 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Nr1i3O35627 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Nr1i3O35627 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nr1i3O35627 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nr1i3O35627 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nr1i3O35627 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Nr1i3O35627 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nr1i3O35627 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nr1i3O35627 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nr1i3O35627 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nr1i3O35627 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.62■□□□□ 0.41
Nr1i3O35627 Gm13436-201ENSMUST00000120418 567 ntBASIC17.62■□□□□ 0.41
Nr1i3O35627 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.62■□□□□ 0.41
Nr1i3O35627 Gm37055-201ENSMUST00000191866 133 ntBASIC17.62■□□□□ 0.41
Nr1i3O35627 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.62■□□□□ 0.41
Nr1i3O35627 Gm10566-201ENSMUST00000086739 996 ntBASIC17.62■□□□□ 0.41
Nr1i3O35627 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nr1i3O35627 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nr1i3O35627 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nr1i3O35627 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nr1i3O35627 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC17.62■□□□□ 0.41
Nr1i3O35627 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nr1i3O35627 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nr1i3O35627 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nr1i3O35627 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nr1i3O35627 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nr1i3O35627 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Nr1i3O35627 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nr1i3O35627 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nr1i3O35627 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nr1i3O35627 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Nr1i3O35627 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nr1i3O35627 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Nr1i3O35627 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.61■□□□□ 0.41
Nr1i3O35627 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nr1i3O35627 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC17.61■□□□□ 0.41
Nr1i3O35627 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms