Protein–RNA interactions for Protein: O09039

Sh2b3, SH2B adapter protein 3, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2b3O09039 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sh2b3O09039 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
Sh2b3O09039 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sh2b3O09039 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC14.6□□□□□ -0.07
Sh2b3O09039 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sh2b3O09039 Gm7153-201ENSMUST00000117092 455 ntBASIC14.6□□□□□ -0.07
Sh2b3O09039 Gm27742-201ENSMUST00000184667 60 ntBASIC14.6□□□□□ -0.07
Sh2b3O09039 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC14.6□□□□□ -0.07
Sh2b3O09039 Otx2os1-206ENSMUST00000228153 787 ntBASIC14.6□□□□□ -0.07
Sh2b3O09039 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sh2b3O09039 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sh2b3O09039 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Sh2b3O09039 AC154855.1-201ENSMUST00000227353 1458 ntBASIC14.6□□□□□ -0.07
Sh2b3O09039 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sh2b3O09039 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Sh2b3O09039 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sh2b3O09039 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sh2b3O09039 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sh2b3O09039 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Sh2b3O09039 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sh2b3O09039 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sh2b3O09039 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Sh2b3O09039 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
Sh2b3O09039 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sh2b3O09039 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Sh2b3O09039 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sh2b3O09039 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Sh2b3O09039 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Sh2b3O09039 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Sh2b3O09039 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sh2b3O09039 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Sh2b3O09039 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Sh2b3O09039 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC14.59□□□□□ -0.07
Sh2b3O09039 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sh2b3O09039 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sh2b3O09039 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sh2b3O09039 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sh2b3O09039 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sh2b3O09039 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Sh2b3O09039 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sh2b3O09039 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Sh2b3O09039 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sh2b3O09039 Gm8839-201ENSMUST00000121279 1645 ntBASIC14.59□□□□□ -0.07
Sh2b3O09039 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
Sh2b3O09039 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sh2b3O09039 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sh2b3O09039 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Sh2b3O09039 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Sh2b3O09039 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.07
Sh2b3O09039 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Sh2b3O09039 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sh2b3O09039 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Sh2b3O09039 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sh2b3O09039 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sh2b3O09039 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sh2b3O09039 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Sh2b3O09039 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sh2b3O09039 Gm15743-202ENSMUST00000182690 1901 ntBASIC14.58□□□□□ -0.08
Sh2b3O09039 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC14.58□□□□□ -0.08
Sh2b3O09039 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Sh2b3O09039 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sh2b3O09039 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Sh2b3O09039 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sh2b3O09039 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sh2b3O09039 Haglr-201ENSMUST00000100000 2085 ntBASIC14.57□□□□□ -0.08
Sh2b3O09039 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Sh2b3O09039 Cxcl14-202ENSMUST00000224801 1467 ntBASIC14.57□□□□□ -0.08
Sh2b3O09039 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Sh2b3O09039 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Sh2b3O09039 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sh2b3O09039 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sh2b3O09039 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sh2b3O09039 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sh2b3O09039 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Sh2b3O09039 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC14.57□□□□□ -0.08
Sh2b3O09039 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sh2b3O09039 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sh2b3O09039 Umpk-ps-201ENSMUST00000211897 827 ntBASIC14.57□□□□□ -0.08
Sh2b3O09039 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sh2b3O09039 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Sh2b3O09039 Gm7461-201ENSMUST00000058918 827 ntBASIC14.57□□□□□ -0.08
Sh2b3O09039 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
Sh2b3O09039 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sh2b3O09039 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Sh2b3O09039 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sh2b3O09039 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sh2b3O09039 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sh2b3O09039 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Sh2b3O09039 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sh2b3O09039 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sh2b3O09039 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Sh2b3O09039 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sh2b3O09039 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sh2b3O09039 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sh2b3O09039 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Sh2b3O09039 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sh2b3O09039 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sh2b3O09039 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sh2b3O09039 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sh2b3O09039 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms