Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ercc2O08811 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ercc2O08811 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ercc2O08811 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ercc2O08811 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.81■□□□□ 0.28
Ercc2O08811 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.81■□□□□ 0.28
Ercc2O08811 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ercc2O08811 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ercc2O08811 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Ercc2O08811 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ercc2O08811 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ercc2O08811 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ercc2O08811 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
Ercc2O08811 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ercc2O08811 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ercc2O08811 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ercc2O08811 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ercc2O08811 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ercc2O08811 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ercc2O08811 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ercc2O08811 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ercc2O08811 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ercc2O08811 AA414768-201ENSMUST00000121924 1257 ntBASIC16.8■□□□□ 0.28
Ercc2O08811 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ercc2O08811 Gm6345-202ENSMUST00000180900 204 ntBASIC16.8■□□□□ 0.28
Ercc2O08811 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Ercc2O08811 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.8■□□□□ 0.28
Ercc2O08811 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ercc2O08811 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Ercc2O08811 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ercc2O08811 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ercc2O08811 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ercc2O08811 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ercc2O08811 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ercc2O08811 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.8■□□□□ 0.28
Ercc2O08811 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.8■□□□□ 0.28
Ercc2O08811 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ercc2O08811 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.8■□□□□ 0.28
Ercc2O08811 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ercc2O08811 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ercc2O08811 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ercc2O08811 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ercc2O08811 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
Ercc2O08811 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.79■□□□□ 0.28
Ercc2O08811 Gm25016-201ENSMUST00000158399 131 ntBASIC16.79■□□□□ 0.28
Ercc2O08811 Gm6623-201ENSMUST00000173570 544 ntBASIC16.79■□□□□ 0.28
Ercc2O08811 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ercc2O08811 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Ercc2O08811 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ercc2O08811 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.79■□□□□ 0.28
Ercc2O08811 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ercc2O08811 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ercc2O08811 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ercc2O08811 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ercc2O08811 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ercc2O08811 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ercc2O08811 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Ercc2O08811 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ercc2O08811 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ercc2O08811 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ercc2O08811 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ercc2O08811 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.78■□□□□ 0.28
Ercc2O08811 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.78■□□□□ 0.28
Ercc2O08811 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Ercc2O08811 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Ercc2O08811 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ercc2O08811 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ercc2O08811 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ercc2O08811 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Ercc2O08811 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ercc2O08811 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.78■□□□□ 0.28
Ercc2O08811 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ercc2O08811 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ercc2O08811 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ercc2O08811 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.78■□□□□ 0.28
Ercc2O08811 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ercc2O08811 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ercc2O08811 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Ercc2O08811 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Ercc2O08811 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ercc2O08811 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.78■□□□□ 0.28
Ercc2O08811 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Ercc2O08811 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ercc2O08811 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ercc2O08811 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ercc2O08811 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ercc2O08811 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ercc2O08811 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ercc2O08811 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ercc2O08811 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ercc2O08811 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ercc2O08811 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Ercc2O08811 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ercc2O08811 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ercc2O08811 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ercc2O08811 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ercc2O08811 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ercc2O08811 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Ercc2O08811 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ercc2O08811 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms