Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC17.01■□□□□ 0.31
Ebf3O08791 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ebf3O08791 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ebf3O08791 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Ebf3O08791 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ebf3O08791 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ebf3O08791 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ebf3O08791 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ebf3O08791 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
Ebf3O08791 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Ebf3O08791 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ebf3O08791 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ebf3O08791 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Ebf3O08791 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Ebf3O08791 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
Ebf3O08791 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ebf3O08791 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Ebf3O08791 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ebf3O08791 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Ebf3O08791 Gm7935-201ENSMUST00000100555 1278 ntBASIC17■□□□□ 0.31
Ebf3O08791 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ebf3O08791 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Ebf3O08791 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
Ebf3O08791 Gm10052-201ENSMUST00000168019 960 ntBASIC17■□□□□ 0.31
Ebf3O08791 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC17■□□□□ 0.31
Ebf3O08791 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ebf3O08791 Gm43514-201ENSMUST00000198852 424 ntBASIC17■□□□□ 0.31
Ebf3O08791 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Ebf3O08791 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ebf3O08791 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ebf3O08791 Gm7729-201ENSMUST00000050143 801 ntBASIC17■□□□□ 0.31
Ebf3O08791 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ebf3O08791 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ebf3O08791 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ebf3O08791 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ebf3O08791 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Ebf3O08791 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ebf3O08791 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ebf3O08791 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ebf3O08791 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.99■□□□□ 0.31
Ebf3O08791 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ebf3O08791 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ebf3O08791 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.99■□□□□ 0.31
Ebf3O08791 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ebf3O08791 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ebf3O08791 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ebf3O08791 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC16.99■□□□□ 0.31
Ebf3O08791 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC16.99■□□□□ 0.31
Ebf3O08791 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ebf3O08791 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC16.99■□□□□ 0.31
Ebf3O08791 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.99■□□□□ 0.31
Ebf3O08791 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC16.99■□□□□ 0.31
Ebf3O08791 Gm29707-201ENSMUST00000196325 491 ntBASIC16.99■□□□□ 0.31
Ebf3O08791 Gm18421-201ENSMUST00000204122 625 ntBASIC16.99■□□□□ 0.31
Ebf3O08791 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ebf3O08791 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Ebf3O08791 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ebf3O08791 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.99■□□□□ 0.31
Ebf3O08791 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ebf3O08791 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ebf3O08791 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ebf3O08791 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.99■□□□□ 0.31
Ebf3O08791 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ebf3O08791 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
Ebf3O08791 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ebf3O08791 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ebf3O08791 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ebf3O08791 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ebf3O08791 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Ebf3O08791 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ebf3O08791 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ebf3O08791 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ebf3O08791 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Ebf3O08791 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ebf3O08791 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
Ebf3O08791 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ebf3O08791 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ebf3O08791 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ebf3O08791 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ebf3O08791 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Ebf3O08791 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ebf3O08791 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ebf3O08791 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
Ebf3O08791 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ebf3O08791 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.98■□□□□ 0.31
Ebf3O08791 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ebf3O08791 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ebf3O08791 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.98■□□□□ 0.31
Ebf3O08791 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ebf3O08791 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ebf3O08791 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ebf3O08791 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ebf3O08791 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
Ebf3O08791 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ebf3O08791 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ebf3O08791 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Ebf3O08791 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ebf3O08791 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ebf3O08791 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ebf3O08791 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms