Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
B020004C17RikJ3QP07 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
B020004C17RikJ3QP07 Gm11873-201ENSMUST00000117877 1304 ntBASIC18.28■□□□□ 0.52
B020004C17RikJ3QP07 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
B020004C17RikJ3QP07 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
B020004C17RikJ3QP07 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
B020004C17RikJ3QP07 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
B020004C17RikJ3QP07 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
B020004C17RikJ3QP07 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC18.28■□□□□ 0.52
B020004C17RikJ3QP07 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC18.28■□□□□ 0.52
B020004C17RikJ3QP07 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
B020004C17RikJ3QP07 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
B020004C17RikJ3QP07 AC151286.1-201ENSMUST00000198489 145 ntBASIC18.28■□□□□ 0.52
B020004C17RikJ3QP07 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
B020004C17RikJ3QP07 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
B020004C17RikJ3QP07 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
B020004C17RikJ3QP07 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
B020004C17RikJ3QP07 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
B020004C17RikJ3QP07 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
B020004C17RikJ3QP07 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
B020004C17RikJ3QP07 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
B020004C17RikJ3QP07 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
B020004C17RikJ3QP07 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
B020004C17RikJ3QP07 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
B020004C17RikJ3QP07 Gm15743-202ENSMUST00000182690 1901 ntBASIC18.27■□□□□ 0.52
B020004C17RikJ3QP07 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.27■□□□□ 0.52
B020004C17RikJ3QP07 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
B020004C17RikJ3QP07 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
B020004C17RikJ3QP07 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
B020004C17RikJ3QP07 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
B020004C17RikJ3QP07 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
B020004C17RikJ3QP07 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
B020004C17RikJ3QP07 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
B020004C17RikJ3QP07 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
B020004C17RikJ3QP07 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
B020004C17RikJ3QP07 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
B020004C17RikJ3QP07 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
B020004C17RikJ3QP07 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
B020004C17RikJ3QP07 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
B020004C17RikJ3QP07 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
B020004C17RikJ3QP07 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
B020004C17RikJ3QP07 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
B020004C17RikJ3QP07 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC18.26■□□□□ 0.51
B020004C17RikJ3QP07 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
B020004C17RikJ3QP07 Gm4609-201ENSMUST00000106443 1002 ntBASIC18.26■□□□□ 0.51
B020004C17RikJ3QP07 Gm5138-201ENSMUST00000113842 1002 ntBASIC18.26■□□□□ 0.51
B020004C17RikJ3QP07 Gm15191-201ENSMUST00000117933 1000 ntBASIC18.26■□□□□ 0.51
B020004C17RikJ3QP07 Gm12182-201ENSMUST00000118655 1008 ntBASIC18.26■□□□□ 0.51
B020004C17RikJ3QP07 Gm13882-201ENSMUST00000120886 1002 ntBASIC18.26■□□□□ 0.51
B020004C17RikJ3QP07 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC18.26■□□□□ 0.51
B020004C17RikJ3QP07 Gm10284-201ENSMUST00000145057 1005 ntBASIC18.26■□□□□ 0.51
B020004C17RikJ3QP07 Gm26308-201ENSMUST00000157768 69 ntBASIC18.26■□□□□ 0.51
B020004C17RikJ3QP07 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
B020004C17RikJ3QP07 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
B020004C17RikJ3QP07 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
B020004C17RikJ3QP07 Gm10481-201ENSMUST00000179228 1002 ntBASIC18.26■□□□□ 0.51
B020004C17RikJ3QP07 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC18.26■□□□□ 0.51
B020004C17RikJ3QP07 Gm2574-201ENSMUST00000181051 1002 ntBASIC18.26■□□□□ 0.51
B020004C17RikJ3QP07 Gm3200-201ENSMUST00000181493 1002 ntBASIC18.26■□□□□ 0.51
B020004C17RikJ3QP07 Gm8825-201ENSMUST00000182565 998 ntBASIC18.26■□□□□ 0.51
B020004C17RikJ3QP07 Gm4518-201ENSMUST00000182638 718 ntBASIC18.26■□□□□ 0.51
B020004C17RikJ3QP07 Gm8330-201ENSMUST00000182754 1008 ntBASIC18.26■□□□□ 0.51
B020004C17RikJ3QP07 Gm4575-201ENSMUST00000182991 1002 ntBASIC18.26■□□□□ 0.51
B020004C17RikJ3QP07 Gm8709-201ENSMUST00000183230 1012 ntBASIC18.26■□□□□ 0.51
B020004C17RikJ3QP07 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
B020004C17RikJ3QP07 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
B020004C17RikJ3QP07 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC18.26■□□□□ 0.51
B020004C17RikJ3QP07 Gm10293-201ENSMUST00000076317 1002 ntBASIC18.26■□□□□ 0.51
B020004C17RikJ3QP07 Gm6316-201ENSMUST00000082064 1020 ntBASIC18.26■□□□□ 0.51
B020004C17RikJ3QP07 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
B020004C17RikJ3QP07 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
B020004C17RikJ3QP07 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
B020004C17RikJ3QP07 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
B020004C17RikJ3QP07 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
B020004C17RikJ3QP07 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
B020004C17RikJ3QP07 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
B020004C17RikJ3QP07 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
B020004C17RikJ3QP07 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
B020004C17RikJ3QP07 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
B020004C17RikJ3QP07 AC154231.1-201ENSMUST00000220564 2175 ntBASIC18.25■□□□□ 0.51
B020004C17RikJ3QP07 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
B020004C17RikJ3QP07 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
B020004C17RikJ3QP07 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
B020004C17RikJ3QP07 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
B020004C17RikJ3QP07 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC18.25■□□□□ 0.51
B020004C17RikJ3QP07 Gm5682-201ENSMUST00000173402 505 ntBASIC18.25■□□□□ 0.51
B020004C17RikJ3QP07 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
B020004C17RikJ3QP07 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC18.25■□□□□ 0.51
B020004C17RikJ3QP07 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC18.25■□□□□ 0.51
B020004C17RikJ3QP07 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
B020004C17RikJ3QP07 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
B020004C17RikJ3QP07 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
B020004C17RikJ3QP07 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
B020004C17RikJ3QP07 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC18.25■□□□□ 0.51
B020004C17RikJ3QP07 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
B020004C17RikJ3QP07 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.25■□□□□ 0.51
B020004C17RikJ3QP07 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
B020004C17RikJ3QP07 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
B020004C17RikJ3QP07 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
B020004C17RikJ3QP07 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 107.3 ms