Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Shisa8J3QNX5 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Shisa8J3QNX5 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Shisa8J3QNX5 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Shisa8J3QNX5 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
Shisa8J3QNX5 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
Shisa8J3QNX5 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Shisa8J3QNX5 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Shisa8J3QNX5 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Shisa8J3QNX5 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC15.03■□□□□ -0
Shisa8J3QNX5 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
Shisa8J3QNX5 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC15.03■□□□□ -0
Shisa8J3QNX5 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Shisa8J3QNX5 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Shisa8J3QNX5 AC153526.5-201ENSMUST00000218661 2147 ntBASIC15.02■□□□□ -0
Shisa8J3QNX5 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
Shisa8J3QNX5 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC15.02■□□□□ -0
Shisa8J3QNX5 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Shisa8J3QNX5 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC15.02■□□□□ -0
Shisa8J3QNX5 Gm37179-201ENSMUST00000194862 823 ntBASIC15.02■□□□□ -0
Shisa8J3QNX5 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Shisa8J3QNX5 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Shisa8J3QNX5 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Shisa8J3QNX5 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Shisa8J3QNX5 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Shisa8J3QNX5 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Shisa8J3QNX5 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Shisa8J3QNX5 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Shisa8J3QNX5 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Shisa8J3QNX5 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Shisa8J3QNX5 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Shisa8J3QNX5 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Shisa8J3QNX5 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Shisa8J3QNX5 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Shisa8J3QNX5 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Shisa8J3QNX5 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Shisa8J3QNX5 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Shisa8J3QNX5 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC15.01□□□□□ -0.01
Shisa8J3QNX5 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Shisa8J3QNX5 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Shisa8J3QNX5 Gm3807-201ENSMUST00000193520 1168 ntBASIC15.01□□□□□ -0.01
Shisa8J3QNX5 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC15.01□□□□□ -0.01
Shisa8J3QNX5 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC15.01□□□□□ -0.01
Shisa8J3QNX5 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Shisa8J3QNX5 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Shisa8J3QNX5 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Shisa8J3QNX5 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Shisa8J3QNX5 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Shisa8J3QNX5 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Shisa8J3QNX5 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Shisa8J3QNX5 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
Shisa8J3QNX5 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC15.01□□□□□ -0.01
Shisa8J3QNX5 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Shisa8J3QNX5 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Shisa8J3QNX5 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Shisa8J3QNX5 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Shisa8J3QNX5 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Shisa8J3QNX5 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Shisa8J3QNX5 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC15□□□□□ -0.01
Shisa8J3QNX5 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Shisa8J3QNX5 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Shisa8J3QNX5 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Shisa8J3QNX5 Gm12933-201ENSMUST00000120203 872 ntBASIC15□□□□□ -0.01
Shisa8J3QNX5 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC15□□□□□ -0.01
Shisa8J3QNX5 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15□□□□□ -0.01
Shisa8J3QNX5 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Shisa8J3QNX5 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Shisa8J3QNX5 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Shisa8J3QNX5 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Shisa8J3QNX5 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Shisa8J3QNX5 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Shisa8J3QNX5 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
Shisa8J3QNX5 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15□□□□□ -0.01
Shisa8J3QNX5 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
Shisa8J3QNX5 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Shisa8J3QNX5 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Shisa8J3QNX5 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Shisa8J3QNX5 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Shisa8J3QNX5 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Shisa8J3QNX5 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Shisa8J3QNX5 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Shisa8J3QNX5 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Shisa8J3QNX5 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.99□□□□□ -0.01
Shisa8J3QNX5 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Shisa8J3QNX5 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Shisa8J3QNX5 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Shisa8J3QNX5 Gm43183-201ENSMUST00000200632 547 ntBASIC14.99□□□□□ -0.01
Shisa8J3QNX5 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Shisa8J3QNX5 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Shisa8J3QNX5 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Shisa8J3QNX5 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Shisa8J3QNX5 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Shisa8J3QNX5 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Shisa8J3QNX5 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Shisa8J3QNX5 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Shisa8J3QNX5 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC14.99□□□□□ -0.01
Shisa8J3QNX5 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Shisa8J3QNX5 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Shisa8J3QNX5 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
Shisa8J3QNX5 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms