Protein–RNA interactions for Protein: G3UY57

Trim15, Tripartite motif protein 15, isoform CRA_a, mousemouse

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim15G3UY57 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Trim15G3UY57 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
Trim15G3UY57 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim15G3UY57 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim15G3UY57 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim15G3UY57 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.12■□□□□ 0.01
Trim15G3UY57 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC15.12■□□□□ 0.01
Trim15G3UY57 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim15G3UY57 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim15G3UY57 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim15G3UY57 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.12■□□□□ 0.01
Trim15G3UY57 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim15G3UY57 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim15G3UY57 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim15G3UY57 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim15G3UY57 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim15G3UY57 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim15G3UY57 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim15G3UY57 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim15G3UY57 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim15G3UY57 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim15G3UY57 Tfap2a-209ENSMUST00000225180 1828 ntBASIC15.11■□□□□ 0.01
Trim15G3UY57 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim15G3UY57 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim15G3UY57 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC15.11■□□□□ 0.01
Trim15G3UY57 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim15G3UY57 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim15G3UY57 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC15.11■□□□□ 0.01
Trim15G3UY57 Gm27454-201ENSMUST00000185090 204 ntBASIC15.11■□□□□ 0.01
Trim15G3UY57 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC15.11■□□□□ 0.01
Trim15G3UY57 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC15.11■□□□□ 0.01
Trim15G3UY57 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim15G3UY57 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15.11■□□□□ 0.01
Trim15G3UY57 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim15G3UY57 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim15G3UY57 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
Trim15G3UY57 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Trim15G3UY57 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim15G3UY57 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim15G3UY57 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim15G3UY57 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim15G3UY57 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
Trim15G3UY57 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim15G3UY57 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Trim15G3UY57 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim15G3UY57 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim15G3UY57 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim15G3UY57 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC15.1■□□□□ 0.01
Trim15G3UY57 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim15G3UY57 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim15G3UY57 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim15G3UY57 Gm44616-201ENSMUST00000206417 1732 ntBASIC15.1■□□□□ 0.01
Trim15G3UY57 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim15G3UY57 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim15G3UY57 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim15G3UY57 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Trim15G3UY57 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim15G3UY57 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim15G3UY57 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim15G3UY57 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim15G3UY57 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim15G3UY57 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim15G3UY57 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim15G3UY57 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Trim15G3UY57 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim15G3UY57 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim15G3UY57 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim15G3UY57 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC15.1■□□□□ 0.01
Trim15G3UY57 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim15G3UY57 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Trim15G3UY57 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim15G3UY57 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim15G3UY57 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Trim15G3UY57 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trim15G3UY57 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim15G3UY57 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim15G3UY57 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim15G3UY57 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim15G3UY57 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC15.09■□□□□ 0.01
Trim15G3UY57 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Trim15G3UY57 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim15G3UY57 Gm19721-201ENSMUST00000195284 1764 ntBASIC15.09■□□□□ 0.01
Trim15G3UY57 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim15G3UY57 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC15.09■□□□□ 0.01
Trim15G3UY57 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Trim15G3UY57 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trim15G3UY57 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim15G3UY57 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim15G3UY57 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Trim15G3UY57 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim15G3UY57 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trim15G3UY57 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC15.09■□□□□ 0.01
Trim15G3UY57 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim15G3UY57 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trim15G3UY57 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Trim15G3UY57 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim15G3UY57 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim15G3UY57 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim15G3UY57 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim15G3UY57 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms