Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh9F8VPK8 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh9F8VPK8 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Pcdh9F8VPK8 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.85■□□□□ 0.29
Pcdh9F8VPK8 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh9F8VPK8 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh9F8VPK8 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Pcdh9F8VPK8 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh9F8VPK8 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh9F8VPK8 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.84■□□□□ 0.29
Pcdh9F8VPK8 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.84■□□□□ 0.29
Pcdh9F8VPK8 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh9F8VPK8 Gm11539-201ENSMUST00000119837 557 ntBASIC16.84■□□□□ 0.29
Pcdh9F8VPK8 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.84■□□□□ 0.29
Pcdh9F8VPK8 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh9F8VPK8 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh9F8VPK8 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh9F8VPK8 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh9F8VPK8 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh9F8VPK8 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.84■□□□□ 0.29
Pcdh9F8VPK8 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh9F8VPK8 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.84■□□□□ 0.29
Pcdh9F8VPK8 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh9F8VPK8 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh9F8VPK8 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh9F8VPK8 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
Pcdh9F8VPK8 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Pcdh9F8VPK8 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Pcdh9F8VPK8 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Pcdh9F8VPK8 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh9F8VPK8 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.83■□□□□ 0.28
Pcdh9F8VPK8 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh9F8VPK8 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.83■□□□□ 0.28
Pcdh9F8VPK8 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh9F8VPK8 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.83■□□□□ 0.28
Pcdh9F8VPK8 Gm30025-201ENSMUST00000218555 728 ntBASIC16.83■□□□□ 0.28
Pcdh9F8VPK8 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC16.83■□□□□ 0.28
Pcdh9F8VPK8 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh9F8VPK8 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh9F8VPK8 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh9F8VPK8 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh9F8VPK8 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh9F8VPK8 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh9F8VPK8 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh9F8VPK8 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh9F8VPK8 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Pcdh9F8VPK8 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh9F8VPK8 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh9F8VPK8 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh9F8VPK8 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh9F8VPK8 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.82■□□□□ 0.28
Pcdh9F8VPK8 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.82■□□□□ 0.28
Pcdh9F8VPK8 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh9F8VPK8 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh9F8VPK8 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.82■□□□□ 0.28
Pcdh9F8VPK8 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh9F8VPK8 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.82■□□□□ 0.28
Pcdh9F8VPK8 Gm44450-201ENSMUST00000199528 114 ntBASIC16.82■□□□□ 0.28
Pcdh9F8VPK8 Gm7370-201ENSMUST00000219471 767 ntBASIC16.82■□□□□ 0.28
Pcdh9F8VPK8 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Pcdh9F8VPK8 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh9F8VPK8 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh9F8VPK8 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Pcdh9F8VPK8 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh9F8VPK8 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Pcdh9F8VPK8 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.82■□□□□ 0.28
Pcdh9F8VPK8 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh9F8VPK8 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh9F8VPK8 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh9F8VPK8 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh9F8VPK8 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh9F8VPK8 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh9F8VPK8 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh9F8VPK8 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh9F8VPK8 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh9F8VPK8 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh9F8VPK8 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh9F8VPK8 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh9F8VPK8 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh9F8VPK8 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.81■□□□□ 0.28
Pcdh9F8VPK8 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh9F8VPK8 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Pcdh9F8VPK8 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh9F8VPK8 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh9F8VPK8 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh9F8VPK8 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh9F8VPK8 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.81■□□□□ 0.28
Pcdh9F8VPK8 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh9F8VPK8 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Pcdh9F8VPK8 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Pcdh9F8VPK8 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.81■□□□□ 0.28
Pcdh9F8VPK8 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh9F8VPK8 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh9F8VPK8 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.81■□□□□ 0.28
Pcdh9F8VPK8 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh9F8VPK8 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
Pcdh9F8VPK8 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.81■□□□□ 0.28
Pcdh9F8VPK8 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh9F8VPK8 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh9F8VPK8 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms