Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Hfm1D3Z4R1 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Hfm1D3Z4R1 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Hfm1D3Z4R1 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC22.93■■□□□ 1.26
Hfm1D3Z4R1 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Hfm1D3Z4R1 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC22.93■■□□□ 1.26
Hfm1D3Z4R1 Gm13616-201ENSMUST00000120600 222 ntBASIC22.93■■□□□ 1.26
Hfm1D3Z4R1 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Hfm1D3Z4R1 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Hfm1D3Z4R1 Gm17271-201ENSMUST00000165535 355 ntBASIC22.93■■□□□ 1.26
Hfm1D3Z4R1 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC22.93■■□□□ 1.26
Hfm1D3Z4R1 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
Hfm1D3Z4R1 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC22.93■■□□□ 1.26
Hfm1D3Z4R1 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
Hfm1D3Z4R1 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Hfm1D3Z4R1 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC22.93■■□□□ 1.26
Hfm1D3Z4R1 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
Hfm1D3Z4R1 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
Hfm1D3Z4R1 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Hfm1D3Z4R1 Gm4609-201ENSMUST00000106443 1002 ntBASIC22.92■■□□□ 1.26
Hfm1D3Z4R1 Gm5138-201ENSMUST00000113842 1002 ntBASIC22.92■■□□□ 1.26
Hfm1D3Z4R1 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Hfm1D3Z4R1 Gm15191-201ENSMUST00000117933 1000 ntBASIC22.92■■□□□ 1.26
Hfm1D3Z4R1 Gm12182-201ENSMUST00000118655 1008 ntBASIC22.92■■□□□ 1.26
Hfm1D3Z4R1 Gm13882-201ENSMUST00000120886 1002 ntBASIC22.92■■□□□ 1.26
Hfm1D3Z4R1 Gm10284-201ENSMUST00000145057 1005 ntBASIC22.92■■□□□ 1.26
Hfm1D3Z4R1 Gm10481-201ENSMUST00000179228 1002 ntBASIC22.92■■□□□ 1.26
Hfm1D3Z4R1 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC22.92■■□□□ 1.26
Hfm1D3Z4R1 Gm2574-201ENSMUST00000181051 1002 ntBASIC22.92■■□□□ 1.26
Hfm1D3Z4R1 Gm3200-201ENSMUST00000181493 1002 ntBASIC22.92■■□□□ 1.26
Hfm1D3Z4R1 Gm8825-201ENSMUST00000182565 998 ntBASIC22.92■■□□□ 1.26
Hfm1D3Z4R1 Gm4518-201ENSMUST00000182638 718 ntBASIC22.92■■□□□ 1.26
Hfm1D3Z4R1 Gm8330-201ENSMUST00000182754 1008 ntBASIC22.92■■□□□ 1.26
Hfm1D3Z4R1 Gm4575-201ENSMUST00000182991 1002 ntBASIC22.92■■□□□ 1.26
Hfm1D3Z4R1 Gm8709-201ENSMUST00000183230 1012 ntBASIC22.92■■□□□ 1.26
Hfm1D3Z4R1 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC22.92■■□□□ 1.26
Hfm1D3Z4R1 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
Hfm1D3Z4R1 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC22.92■■□□□ 1.26
Hfm1D3Z4R1 AC093926.2-201ENSMUST00000214468 1228 ntBASIC22.92■■□□□ 1.26
Hfm1D3Z4R1 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Hfm1D3Z4R1 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Hfm1D3Z4R1 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Hfm1D3Z4R1 Gm10293-201ENSMUST00000076317 1002 ntBASIC22.92■■□□□ 1.26
Hfm1D3Z4R1 Gm6316-201ENSMUST00000082064 1020 ntBASIC22.92■■□□□ 1.26
Hfm1D3Z4R1 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Hfm1D3Z4R1 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Hfm1D3Z4R1 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Hfm1D3Z4R1 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Hfm1D3Z4R1 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Hfm1D3Z4R1 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Hfm1D3Z4R1 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Hfm1D3Z4R1 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Hfm1D3Z4R1 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Hfm1D3Z4R1 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
Hfm1D3Z4R1 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Hfm1D3Z4R1 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
Hfm1D3Z4R1 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Hfm1D3Z4R1 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
Hfm1D3Z4R1 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Hfm1D3Z4R1 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC22.91■■□□□ 1.26
Hfm1D3Z4R1 Gm27494-201ENSMUST00000184735 189 ntBASIC22.91■■□□□ 1.26
Hfm1D3Z4R1 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Hfm1D3Z4R1 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Hfm1D3Z4R1 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Hfm1D3Z4R1 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Hfm1D3Z4R1 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Hfm1D3Z4R1 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC22.91■■□□□ 1.26
Hfm1D3Z4R1 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
Hfm1D3Z4R1 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Hfm1D3Z4R1 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Hfm1D3Z4R1 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
Hfm1D3Z4R1 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Hfm1D3Z4R1 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Hfm1D3Z4R1 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC22.91■■□□□ 1.26
Hfm1D3Z4R1 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC22.91■■□□□ 1.26
Hfm1D3Z4R1 Gm44492-201ENSMUST00000197012 141 ntBASIC22.91■■□□□ 1.26
Hfm1D3Z4R1 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Hfm1D3Z4R1 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Hfm1D3Z4R1 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
Hfm1D3Z4R1 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Hfm1D3Z4R1 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
Hfm1D3Z4R1 Gm37519-201ENSMUST00000191687 2210 ntBASIC22.9■■□□□ 1.26
Hfm1D3Z4R1 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC22.9■■□□□ 1.26
Hfm1D3Z4R1 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Hfm1D3Z4R1 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC22.9■■□□□ 1.26
Hfm1D3Z4R1 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
Hfm1D3Z4R1 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC22.9■■□□□ 1.26
Hfm1D3Z4R1 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Hfm1D3Z4R1 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC22.9■■□□□ 1.26
Hfm1D3Z4R1 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
Hfm1D3Z4R1 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Hfm1D3Z4R1 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC22.9■■□□□ 1.26
Hfm1D3Z4R1 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.26
Hfm1D3Z4R1 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.26
Hfm1D3Z4R1 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
Hfm1D3Z4R1 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Hfm1D3Z4R1 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Hfm1D3Z4R1 Zcchc6-207ENSMUST00000225576 2499 ntBASIC22.89■■□□□ 1.25
Hfm1D3Z4R1 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC22.89■■□□□ 1.25
Hfm1D3Z4R1 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms