Protein–RNA interactions for Protein: D3Z3K2

Ccnb1ip1, E3 ubiquitin-protein ligase CCNB1IP1, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccnb1ip1D3Z3K2 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccnb1ip1D3Z3K2 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccnb1ip1D3Z3K2 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Ccnb1ip1D3Z3K2 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Ccnb1ip1D3Z3K2 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccnb1ip1D3Z3K2 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccnb1ip1D3Z3K2 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC14.93□□□□□ -0.02
Ccnb1ip1D3Z3K2 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccnb1ip1D3Z3K2 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccnb1ip1D3Z3K2 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccnb1ip1D3Z3K2 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccnb1ip1D3Z3K2 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccnb1ip1D3Z3K2 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.92□□□□□ -0.02
Ccnb1ip1D3Z3K2 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccnb1ip1D3Z3K2 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccnb1ip1D3Z3K2 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccnb1ip1D3Z3K2 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccnb1ip1D3Z3K2 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccnb1ip1D3Z3K2 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
Ccnb1ip1D3Z3K2 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccnb1ip1D3Z3K2 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ccnb1ip1D3Z3K2 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccnb1ip1D3Z3K2 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccnb1ip1D3Z3K2 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccnb1ip1D3Z3K2 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccnb1ip1D3Z3K2 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccnb1ip1D3Z3K2 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccnb1ip1D3Z3K2 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccnb1ip1D3Z3K2 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccnb1ip1D3Z3K2 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccnb1ip1D3Z3K2 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccnb1ip1D3Z3K2 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccnb1ip1D3Z3K2 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Ccnb1ip1D3Z3K2 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccnb1ip1D3Z3K2 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccnb1ip1D3Z3K2 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Ccnb1ip1D3Z3K2 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ccnb1ip1D3Z3K2 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Ccnb1ip1D3Z3K2 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccnb1ip1D3Z3K2 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccnb1ip1D3Z3K2 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ccnb1ip1D3Z3K2 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccnb1ip1D3Z3K2 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.91□□□□□ -0.02
Ccnb1ip1D3Z3K2 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccnb1ip1D3Z3K2 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccnb1ip1D3Z3K2 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccnb1ip1D3Z3K2 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.91□□□□□ -0.02
Ccnb1ip1D3Z3K2 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccnb1ip1D3Z3K2 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ccnb1ip1D3Z3K2 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccnb1ip1D3Z3K2 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.9□□□□□ -0.02
Ccnb1ip1D3Z3K2 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Ccnb1ip1D3Z3K2 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ccnb1ip1D3Z3K2 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccnb1ip1D3Z3K2 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccnb1ip1D3Z3K2 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Ccnb1ip1D3Z3K2 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
Ccnb1ip1D3Z3K2 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccnb1ip1D3Z3K2 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ccnb1ip1D3Z3K2 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccnb1ip1D3Z3K2 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccnb1ip1D3Z3K2 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccnb1ip1D3Z3K2 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccnb1ip1D3Z3K2 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccnb1ip1D3Z3K2 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccnb1ip1D3Z3K2 Gm11643-201ENSMUST00000119578 864 ntBASIC14.9□□□□□ -0.02
Ccnb1ip1D3Z3K2 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC14.9□□□□□ -0.02
Ccnb1ip1D3Z3K2 Gm45102-201ENSMUST00000207427 857 ntBASIC14.9□□□□□ -0.02
Ccnb1ip1D3Z3K2 AC093043.1-201ENSMUST00000226700 898 ntBASIC14.9□□□□□ -0.02
Ccnb1ip1D3Z3K2 Zfp783-201ENSMUST00000095946 670 ntBASIC14.9□□□□□ -0.02
Ccnb1ip1D3Z3K2 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Ccnb1ip1D3Z3K2 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccnb1ip1D3Z3K2 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccnb1ip1D3Z3K2 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccnb1ip1D3Z3K2 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC14.9□□□□□ -0.02
Ccnb1ip1D3Z3K2 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccnb1ip1D3Z3K2 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccnb1ip1D3Z3K2 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccnb1ip1D3Z3K2 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Ccnb1ip1D3Z3K2 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.9□□□□□ -0.02
Ccnb1ip1D3Z3K2 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccnb1ip1D3Z3K2 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccnb1ip1D3Z3K2 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccnb1ip1D3Z3K2 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ccnb1ip1D3Z3K2 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ccnb1ip1D3Z3K2 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ccnb1ip1D3Z3K2 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccnb1ip1D3Z3K2 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccnb1ip1D3Z3K2 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccnb1ip1D3Z3K2 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccnb1ip1D3Z3K2 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccnb1ip1D3Z3K2 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccnb1ip1D3Z3K2 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccnb1ip1D3Z3K2 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC14.89□□□□□ -0.03
Ccnb1ip1D3Z3K2 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccnb1ip1D3Z3K2 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC14.89□□□□□ -0.03
Ccnb1ip1D3Z3K2 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC14.89□□□□□ -0.03
Ccnb1ip1D3Z3K2 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Ccnb1ip1D3Z3K2 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccnb1ip1D3Z3K2 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 116.9 ms