Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shank1D3YZU1 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shank1D3YZU1 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shank1D3YZU1 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shank1D3YZU1 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shank1D3YZU1 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shank1D3YZU1 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.67□□□□□ -0.06
Shank1D3YZU1 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Shank1D3YZU1 Gm12497-201ENSMUST00000138778 237 ntBASIC14.67□□□□□ -0.06
Shank1D3YZU1 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Shank1D3YZU1 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.67□□□□□ -0.06
Shank1D3YZU1 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Shank1D3YZU1 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shank1D3YZU1 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC14.67□□□□□ -0.06
Shank1D3YZU1 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shank1D3YZU1 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shank1D3YZU1 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shank1D3YZU1 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Shank1D3YZU1 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Shank1D3YZU1 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC14.66□□□□□ -0.06
Shank1D3YZU1 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Shank1D3YZU1 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Shank1D3YZU1 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Shank1D3YZU1 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Shank1D3YZU1 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Shank1D3YZU1 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Shank1D3YZU1 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC14.66□□□□□ -0.06
Shank1D3YZU1 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.66□□□□□ -0.06
Shank1D3YZU1 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Shank1D3YZU1 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Shank1D3YZU1 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Shank1D3YZU1 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.66□□□□□ -0.06
Shank1D3YZU1 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Shank1D3YZU1 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC14.66□□□□□ -0.06
Shank1D3YZU1 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC14.66□□□□□ -0.06
Shank1D3YZU1 Gm13418-201ENSMUST00000119097 944 ntBASIC14.66□□□□□ -0.06
Shank1D3YZU1 Gm6184-201ENSMUST00000120403 1261 ntBASIC14.66□□□□□ -0.06
Shank1D3YZU1 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Shank1D3YZU1 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC14.66□□□□□ -0.06
Shank1D3YZU1 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.66□□□□□ -0.06
Shank1D3YZU1 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.66□□□□□ -0.06
Shank1D3YZU1 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Shank1D3YZU1 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Shank1D3YZU1 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Shank1D3YZU1 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Shank1D3YZU1 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Shank1D3YZU1 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Shank1D3YZU1 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Shank1D3YZU1 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Shank1D3YZU1 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Shank1D3YZU1 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Shank1D3YZU1 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Shank1D3YZU1 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Shank1D3YZU1 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Shank1D3YZU1 Gm27397-201ENSMUST00000184997 107 ntBASIC14.65□□□□□ -0.06
Shank1D3YZU1 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC14.65□□□□□ -0.06
Shank1D3YZU1 AV026068-213ENSMUST00000223675 1171 ntBASIC14.65□□□□□ -0.06
Shank1D3YZU1 AC225888.1-201ENSMUST00000227184 728 ntBASIC14.65□□□□□ -0.06
Shank1D3YZU1 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Shank1D3YZU1 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Shank1D3YZU1 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Shank1D3YZU1 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Shank1D3YZU1 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Shank1D3YZU1 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC14.65□□□□□ -0.06
Shank1D3YZU1 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC14.65□□□□□ -0.06
Shank1D3YZU1 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Shank1D3YZU1 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Shank1D3YZU1 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Shank1D3YZU1 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Shank1D3YZU1 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Shank1D3YZU1 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Shank1D3YZU1 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Shank1D3YZU1 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Shank1D3YZU1 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Shank1D3YZU1 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Shank1D3YZU1 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Shank1D3YZU1 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Shank1D3YZU1 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Shank1D3YZU1 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
Shank1D3YZU1 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC14.64□□□□□ -0.07
Shank1D3YZU1 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Shank1D3YZU1 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Shank1D3YZU1 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC14.64□□□□□ -0.07
Shank1D3YZU1 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Shank1D3YZU1 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Shank1D3YZU1 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Shank1D3YZU1 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Shank1D3YZU1 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Shank1D3YZU1 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Shank1D3YZU1 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Shank1D3YZU1 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Shank1D3YZU1 Gm6089-201ENSMUST00000197666 938 ntBASIC14.64□□□□□ -0.07
Shank1D3YZU1 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Shank1D3YZU1 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.64□□□□□ -0.07
Shank1D3YZU1 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Shank1D3YZU1 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC14.64□□□□□ -0.07
Shank1D3YZU1 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Shank1D3YZU1 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Shank1D3YZU1 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Shank1D3YZU1 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms