Protein–RNA interactions for Protein: D3YU81

Rfx8, DNA-binding protein RFX8, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx8D3YU81 Gm29707-201ENSMUST00000196325 491 ntBASIC17.4■□□□□ 0.38
Rfx8D3YU81 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.4■□□□□ 0.38
Rfx8D3YU81 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfx8D3YU81 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfx8D3YU81 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.4■□□□□ 0.38
Rfx8D3YU81 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfx8D3YU81 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Rfx8D3YU81 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfx8D3YU81 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfx8D3YU81 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Rfx8D3YU81 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfx8D3YU81 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rfx8D3YU81 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Rfx8D3YU81 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Rfx8D3YU81 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rfx8D3YU81 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rfx8D3YU81 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rfx8D3YU81 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.39■□□□□ 0.37
Rfx8D3YU81 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Rfx8D3YU81 Gm23634-201ENSMUST00000175071 91 ntBASIC17.39■□□□□ 0.37
Rfx8D3YU81 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rfx8D3YU81 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.39■□□□□ 0.37
Rfx8D3YU81 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.39■□□□□ 0.37
Rfx8D3YU81 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rfx8D3YU81 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rfx8D3YU81 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rfx8D3YU81 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rfx8D3YU81 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
Rfx8D3YU81 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rfx8D3YU81 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rfx8D3YU81 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rfx8D3YU81 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Rfx8D3YU81 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rfx8D3YU81 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rfx8D3YU81 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rfx8D3YU81 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rfx8D3YU81 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Rfx8D3YU81 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rfx8D3YU81 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rfx8D3YU81 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.38■□□□□ 0.37
Rfx8D3YU81 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.38■□□□□ 0.37
Rfx8D3YU81 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.38■□□□□ 0.37
Rfx8D3YU81 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.38■□□□□ 0.37
Rfx8D3YU81 Gm18421-201ENSMUST00000204122 625 ntBASIC17.38■□□□□ 0.37
Rfx8D3YU81 Gm5587-201ENSMUST00000206270 674 ntBASIC17.38■□□□□ 0.37
Rfx8D3YU81 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rfx8D3YU81 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rfx8D3YU81 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.38■□□□□ 0.37
Rfx8D3YU81 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rfx8D3YU81 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rfx8D3YU81 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Rfx8D3YU81 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Rfx8D3YU81 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Rfx8D3YU81 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Rfx8D3YU81 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rfx8D3YU81 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rfx8D3YU81 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rfx8D3YU81 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Rfx8D3YU81 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rfx8D3YU81 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfx8D3YU81 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfx8D3YU81 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rfx8D3YU81 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfx8D3YU81 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rfx8D3YU81 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rfx8D3YU81 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rfx8D3YU81 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rfx8D3YU81 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.37■□□□□ 0.37
Rfx8D3YU81 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfx8D3YU81 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfx8D3YU81 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rfx8D3YU81 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfx8D3YU81 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfx8D3YU81 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfx8D3YU81 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfx8D3YU81 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfx8D3YU81 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfx8D3YU81 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rfx8D3YU81 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rfx8D3YU81 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
Rfx8D3YU81 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rfx8D3YU81 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rfx8D3YU81 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Rfx8D3YU81 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rfx8D3YU81 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rfx8D3YU81 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rfx8D3YU81 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rfx8D3YU81 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rfx8D3YU81 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rfx8D3YU81 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Rfx8D3YU81 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rfx8D3YU81 AA414768-201ENSMUST00000121924 1257 ntBASIC17.36■□□□□ 0.37
Rfx8D3YU81 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Rfx8D3YU81 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rfx8D3YU81 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
Rfx8D3YU81 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rfx8D3YU81 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rfx8D3YU81 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Rfx8D3YU81 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rfx8D3YU81 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms