Protein–RNA interactions for Protein: B5KM66

Syce3, Synaptonemal complex central element protein 3, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syce3B5KM66 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Syce3B5KM66 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Syce3B5KM66 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Syce3B5KM66 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.86■□□□□ 0.61
Syce3B5KM66 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Syce3B5KM66 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Syce3B5KM66 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Syce3B5KM66 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
Syce3B5KM66 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Syce3B5KM66 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Syce3B5KM66 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Syce3B5KM66 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
Syce3B5KM66 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Syce3B5KM66 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Syce3B5KM66 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Syce3B5KM66 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.85■□□□□ 0.61
Syce3B5KM66 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Syce3B5KM66 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Syce3B5KM66 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Syce3B5KM66 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Syce3B5KM66 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Syce3B5KM66 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Syce3B5KM66 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Syce3B5KM66 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Syce3B5KM66 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Syce3B5KM66 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Syce3B5KM66 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Syce3B5KM66 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC18.84■□□□□ 0.61
Syce3B5KM66 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Syce3B5KM66 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Syce3B5KM66 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.84■□□□□ 0.61
Syce3B5KM66 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Syce3B5KM66 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Syce3B5KM66 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Syce3B5KM66 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Syce3B5KM66 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Syce3B5KM66 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Syce3B5KM66 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Syce3B5KM66 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Syce3B5KM66 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Syce3B5KM66 Gm37292-201ENSMUST00000192062 758 ntBASIC18.84■□□□□ 0.61
Syce3B5KM66 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Syce3B5KM66 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Syce3B5KM66 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Syce3B5KM66 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Syce3B5KM66 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Syce3B5KM66 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Syce3B5KM66 App-207ENSMUST00000227737 2827 ntBASIC18.84■□□□□ 0.61
Syce3B5KM66 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Syce3B5KM66 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Syce3B5KM66 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
Syce3B5KM66 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Syce3B5KM66 Ntrk2-205ENSMUST00000224402 2284 ntBASIC18.84■□□□□ 0.61
Syce3B5KM66 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Syce3B5KM66 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Syce3B5KM66 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Syce3B5KM66 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Syce3B5KM66 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Syce3B5KM66 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Syce3B5KM66 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Syce3B5KM66 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.83■□□□□ 0.61
Syce3B5KM66 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Syce3B5KM66 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Syce3B5KM66 Gm42569-201ENSMUST00000200539 472 ntBASIC18.83■□□□□ 0.6
Syce3B5KM66 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.83■□□□□ 0.6
Syce3B5KM66 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Syce3B5KM66 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC18.83■□□□□ 0.6
Syce3B5KM66 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Syce3B5KM66 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Syce3B5KM66 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Syce3B5KM66 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC18.83■□□□□ 0.6
Syce3B5KM66 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Syce3B5KM66 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Syce3B5KM66 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Syce3B5KM66 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Syce3B5KM66 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Syce3B5KM66 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Syce3B5KM66 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Syce3B5KM66 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Syce3B5KM66 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Syce3B5KM66 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Syce3B5KM66 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Syce3B5KM66 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC18.82■□□□□ 0.6
Syce3B5KM66 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Syce3B5KM66 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Syce3B5KM66 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Syce3B5KM66 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Syce3B5KM66 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Syce3B5KM66 Gm12896-201ENSMUST00000118430 226 ntBASIC18.82■□□□□ 0.6
Syce3B5KM66 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Syce3B5KM66 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Syce3B5KM66 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.82■□□□□ 0.6
Syce3B5KM66 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Syce3B5KM66 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Syce3B5KM66 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.82■□□□□ 0.6
Syce3B5KM66 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.82■□□□□ 0.6
Syce3B5KM66 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Syce3B5KM66 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Syce3B5KM66 Gm42901-201ENSMUST00000197735 3171 ntBASIC18.82■□□□□ 0.6
Syce3B5KM66 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms