Protein–RNA interactions for Protein: B2RQC2

Usp42, Ubiquitin carboxyl-terminal hydrolase 42, mousemouse

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp42B2RQC2 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Usp42B2RQC2 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp42B2RQC2 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp42B2RQC2 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp42B2RQC2 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Usp42B2RQC2 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Usp42B2RQC2 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp42B2RQC2 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp42B2RQC2 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp42B2RQC2 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC19.21■□□□□ 0.67
Usp42B2RQC2 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC19.21■□□□□ 0.67
Usp42B2RQC2 AC130713.1-201ENSMUST00000228853 1096 ntBASIC19.21■□□□□ 0.67
Usp42B2RQC2 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp42B2RQC2 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Usp42B2RQC2 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp42B2RQC2 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Usp42B2RQC2 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp42B2RQC2 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp42B2RQC2 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Usp42B2RQC2 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC19.2■□□□□ 0.66
Usp42B2RQC2 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp42B2RQC2 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp42B2RQC2 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp42B2RQC2 Gm9889-202ENSMUST00000206983 1577 ntBASIC19.2■□□□□ 0.66
Usp42B2RQC2 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp42B2RQC2 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Usp42B2RQC2 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp42B2RQC2 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp42B2RQC2 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Usp42B2RQC2 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC19.2■□□□□ 0.66
Usp42B2RQC2 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Usp42B2RQC2 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp42B2RQC2 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp42B2RQC2 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC19.2■□□□□ 0.66
Usp42B2RQC2 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
Usp42B2RQC2 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp42B2RQC2 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp42B2RQC2 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp42B2RQC2 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Usp42B2RQC2 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Usp42B2RQC2 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp42B2RQC2 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp42B2RQC2 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp42B2RQC2 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp42B2RQC2 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Usp42B2RQC2 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC19.19■□□□□ 0.66
Usp42B2RQC2 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Usp42B2RQC2 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp42B2RQC2 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp42B2RQC2 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp42B2RQC2 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp42B2RQC2 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp42B2RQC2 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp42B2RQC2 Ighv6-1-201ENSMUST00000193612 343 ntBASIC19.19■□□□□ 0.66
Usp42B2RQC2 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Usp42B2RQC2 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Usp42B2RQC2 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Usp42B2RQC2 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC19.19■□□□□ 0.66
Usp42B2RQC2 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp42B2RQC2 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Usp42B2RQC2 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp42B2RQC2 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp42B2RQC2 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Usp42B2RQC2 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp42B2RQC2 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp42B2RQC2 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Usp42B2RQC2 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC19.18■□□□□ 0.66
Usp42B2RQC2 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC19.18■□□□□ 0.66
Usp42B2RQC2 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp42B2RQC2 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC19.18■□□□□ 0.66
Usp42B2RQC2 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Usp42B2RQC2 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Usp42B2RQC2 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Usp42B2RQC2 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp42B2RQC2 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Usp42B2RQC2 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp42B2RQC2 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp42B2RQC2 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp42B2RQC2 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp42B2RQC2 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp42B2RQC2 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Usp42B2RQC2 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp42B2RQC2 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC19.17■□□□□ 0.66
Usp42B2RQC2 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC19.17■□□□□ 0.66
Usp42B2RQC2 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp42B2RQC2 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Usp42B2RQC2 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp42B2RQC2 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
Usp42B2RQC2 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp42B2RQC2 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp42B2RQC2 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp42B2RQC2 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC19.17■□□□□ 0.66
Usp42B2RQC2 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
Usp42B2RQC2 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp42B2RQC2 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp42B2RQC2 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp42B2RQC2 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp42B2RQC2 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Usp42B2RQC2 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp42B2RQC2 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms